Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1058 ATGAGGGGAGGAGAAACAATCTTGAGTAGCAGAAAACCTTCTGACCATTGCAAAGGAAATATATTGATTAGTGCCAACAGCTATATTGACTACCATTCCCCATTATCATCACCGCCCTTTGGTTCACTTAAACAGACAGAGAAAAAGAAAAGAGTGAAACACAAGGAAAATGGAGGTGAAGGAGCAAGATGTTTCATTGGGAGCCAACAAGTCCCTAGAGAGGCAGTCCATTTTGTGGCCACTTTTGTTTTCCTCTACGTCACCATCTTGACTGTTATTAGGGCGAACCAGTCCAATTACAAGTGCAGTAGTGTTAGGATTAAAGGTATTGCTTGGGCCTTCGGAGGCATAATCTTCGCCCTCGTCTACTGTACCGCTGGCATCTCAGGTTAG 393 0.4402 MRGGETILSSRKPSDHCKGNILISANSYIDYHSPLSSPPFGSLKQTEKKKRVKHKENGGEGARCFIGSQQVPREAVHFVATFVFLYVTILTVIRANQSNYKCSSVRIKGIAWAFGGIIFALVYCTAGISG 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1058 130 Gene3D Glycerol uptake facilitator protein. 71 130 IPR023271 -
Glsi06g1058 130 SUPERFAMILY Aquaporin-like 77 130 IPR023271 -
Glsi06g1058 130 Pfam Major intrinsic protein 77 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g1058 130 PRINTS Major intrinsic protein family signature 114 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g1058 130 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi06g1058 130 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 76 130 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1058 Glsi-ChrGlsi06 14352128 14352755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1058 77 130 Major Intrinsic Protein MIP AT4G00430 66.667 2.90e-20 80.9