Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1053 ATGGATTGTGCAGGTAAGAATAATAATGTTGGTGATGGTAGTGATCAAAGCAGAGGTGGTGGGCCTTGTGGCGCCTGCAAGTTCCTGAGGCGAAAGTGCGTGAAGGGCTGCATATTTGCACCCTATTTTGACTCAGACCAAGGCACGGCTCATTTCGCTGCGGTGCACAAGGTGTTCGGTGCTAGCAATGCCTCCAAGCTGCTCTTGCGAATCCCAGCTCACAAGCGTCTTGATGCTGTTGTTACTCTCTGCTATGAGGCTTTGGCTAGGGCTAGAGACCCCGTCTATGGCTGCGTTGCGCACATCTTTGCTCTTCAACAGCAGGTGGTGAACTTGCAGGCAGAGTTAGCTTATGTTCAAGCTCGCCTTTCCACACTGCAACGCCTCCCTGTAATTCCACCTCTTCCGCAGCCTCAAAGCTCATCTTCACCCACAGACTTGGCATTTTCAAACACTGACTTCCGCTTTGATCCTCTTCTTCATCAACCACATCCAACATCACTAGAACTAAGCAGTTTTCTCAACCCTTCCGATCAACAACTCCTCCATGATGGAGATCTCCAAGCTTTGGCTCGAGAATTTGTGTCAAGATACTTGCCTGGAGTAAGATTCCGGTCACCGGATTCTCACTAA 633 0.4976 MDCAGKNNNVGDGSDQSRGGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLLRIPAHKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQVVNLQAELAYVQARLSTLQRLPVIPPLPQPQSSSSPTDLAFSNTDFRFDPLLHQPHPTSLELSSFLNPSDQQLLHDGDLQALAREFVSRYLPGVRFRSPDSH 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1053 210 PANTHER LOB DOMAIN CONTAINING PROTEIN 20 134 - -
Glsi06g1053 210 MobiDBLite consensus disorder prediction 1 20 - -
Glsi06g1053 210 Pfam Lateral organ boundaries (LOB) domain 22 120 IPR004883 -
Glsi06g1053 210 ProSiteProfiles LOB domain profile. 21 123 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1053 Glsi-ChrGlsi06 14187007 14192950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1053 20 205 AS2 family AT4G00210 58.216 6.75e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi06g1053 LOB 6.5e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1053 06 14187007 14192950 Glsi07g1086 07 14724617 14729394 CCT
Glsi06g1053 06 14187007 14192950 Glsi06g1053 06 14187007 14192950 ECH