Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi06g1053 | ATGGATTGTGCAGGTAAGAATAATAATGTTGGTGATGGTAGTGATCAAAGCAGAGGTGGTGGGCCTTGTGGCGCCTGCAAGTTCCTGAGGCGAAAGTGCGTGAAGGGCTGCATATTTGCACCCTATTTTGACTCAGACCAAGGCACGGCTCATTTCGCTGCGGTGCACAAGGTGTTCGGTGCTAGCAATGCCTCCAAGCTGCTCTTGCGAATCCCAGCTCACAAGCGTCTTGATGCTGTTGTTACTCTCTGCTATGAGGCTTTGGCTAGGGCTAGAGACCCCGTCTATGGCTGCGTTGCGCACATCTTTGCTCTTCAACAGCAGGTGGTGAACTTGCAGGCAGAGTTAGCTTATGTTCAAGCTCGCCTTTCCACACTGCAACGCCTCCCTGTAATTCCACCTCTTCCGCAGCCTCAAAGCTCATCTTCACCCACAGACTTGGCATTTTCAAACACTGACTTCCGCTTTGATCCTCTTCTTCATCAACCACATCCAACATCACTAGAACTAAGCAGTTTTCTCAACCCTTCCGATCAACAACTCCTCCATGATGGAGATCTCCAAGCTTTGGCTCGAGAATTTGTGTCAAGATACTTGCCTGGAGTAAGATTCCGGTCACCGGATTCTCACTAA | 633 | 0.4976 | MDCAGKNNNVGDGSDQSRGGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLLRIPAHKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQVVNLQAELAYVQARLSTLQRLPVIPPLPQPQSSSSPTDLAFSNTDFRFDPLLHQPHPTSLELSSFLNPSDQQLLHDGDLQALAREFVSRYLPGVRFRSPDSH | 210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi06g1053 | 210 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 20 | 134 | - | - | |
Glsi06g1053 | 210 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Glsi06g1053 | 210 | Pfam | Lateral organ boundaries (LOB) domain | 22 | 120 | IPR004883 | - | |
Glsi06g1053 | 210 | ProSiteProfiles | LOB domain profile. | 21 | 123 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi06g1053 | Glsi-ChrGlsi06 | 14187007 | 14192950 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi06g1053 | 20 | 205 | AS2 family | AT4G00210 | 58.216 | 6.75e-73 | 218 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Glsi06g1053 | LOB | 6.5e-37 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi06g1053 | 06 | 14187007 | 14192950 | Glsi07g1086 | 07 | 14724617 | 14729394 | CCT | |
Glsi06g1053 | 06 | 14187007 | 14192950 | Glsi06g1053 | 06 | 14187007 | 14192950 | ECH |