Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1052 ATGAGCATAAATTCGAGTAGTAGCGGCAGTGGTGGCGTTGGCGGTGGTGGAAGCAGTAGTGGGGGTGGCGGGGGAGGCCCGTGTGGCGCCTGCAAATTCCTGAGAAGGAAGTGCGTGCCGGGTTGCATCTTTGCGCCGTACTTCGACTCGGAGCAAGGCGCAACGCACTTTGCGGCGGTGCACAAGGTTTTTGGTGCCAGCAACGTGTCCAAGCTGCTTCTGAACATTCCTGTGCACAAGCGGCTTGACGCTGTGGTCACCATTTGTTATGAGGCACAGTCTCGACTACGAGACCCAGTATATGGCTGTGTTGCCCACATCTTCGCCCTTCAGCAACAGGTGGTGAGTTTACAAGCAGAACTGTCCTACTTACAAGGCCACCTTGCCACATTAGAGTTACCACAACCACCGCCACCTCCTCCACCGCAAGCGGCAATGGCACCGGGTACGTTCTCAATGGCCGACCTCCCATCCGGCTCATCTATGCCGGGGACTTATGATTTATCTTCGCTTTTTGATCCTGTGGCCCAAACTTCATGGGCCATACAACAGCAACGGCCCATTGACCTGCGTCAATATGGGACTAGTGGGCCATCATCAACAAGCAGTGGTGGCGGTGGCGGTGATTTTCAAGCACTGGCTGGAGAACTCCTCCATAGACATGGATCTCCATCTTCAGCTCCGATGGCATGTTCTAATGTCTCCTCGTCATCTCCATCCCTTTCCAAATGA 732 0.5464 MSINSSSSGSGGVGGGGSSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQSRLRDPVYGCVAHIFALQQQVVSLQAELSYLQGHLATLELPQPPPPPPPQAAMAPGTFSMADLPSGSSMPGTYDLSSLFDPVAQTSWAIQQQRPIDLRQYGTSGPSSTSSGGGGGDFQALAGELLHRHGSPSSAPMACSNVSSSSPSLSK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1052 243 MobiDBLite consensus disorder prediction 1 15 - -
Glsi06g1052 243 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
Glsi06g1052 243 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Glsi06g1052 243 PANTHER LOB DOMAIN CONTAINING PROTEIN 25 136 - -
Glsi06g1052 243 MobiDBLite consensus disorder prediction 191 243 - -
Glsi06g1052 243 MobiDBLite consensus disorder prediction 133 158 - -
Glsi06g1052 243 MobiDBLite consensus disorder prediction 191 207 - -
Glsi06g1052 243 MobiDBLite consensus disorder prediction 226 243 - -
Glsi06g1052 243 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1052 Glsi-ChrGlsi06 14130803 14135116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1052 27 224 AS2 family AT2G45420 68.246 3.62e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi06g1052 LOB 5.4e-38 No_clan