Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1043 ATGCTTCAAAGCTTGGTCCCTCGATCCTCCCTCAGCGCGAACCTTAAAGGTAGCTCCTCAATGAAGACCAAGCGCGTGGACCGCGACCTCGACGACAGTGATGATCCTTCGTCATTCAAGAGGCCGACCTCTGGAAGAAATTTCTCCGGCGAAGCTTCAGTGTCTGGTGAGAAGACGATGGAGGAAGGCGAGGGGCACGAGGAGGAGCCACCCTTCGGAGGTACTGAGTCAGCTGGTCTCAGACTCCTCGGGCTGTTGCTGCAATGCGCCGAGTGCGTCGCTATGAACAACTTCGATGGCGCCAGCGACCTCTTGCCGGAGATAGCAGAATTGTCTTCGCCGTACGGGACGTCGCCGGAGCGCGTTGGCGCGTACTTTGCTCACGCTCTGCAGGCACGCGTCTTTAGCTCCTGTCTTGAGAGCTACTCGCCACTCATAACGAAATCGCTCACCCTGAGTCAGTCTCAGCGAATATTTAACGCGTTCCAATCCTACAACTCGGTTTCGCCCCTGGTAAAGTTCTCACACTTCACTGCCAACCAAGCAATCTTCCAAGCTCTGGACGGCGAGGATTGCGTCCATCTCATCGACTTCGACATTATGCAAGGACTTCAATGGCCAGGATTGTTCCACATCCTCGCCTCCCGGTCCAAGAAGATCCGCTCCATGAGGATCACCGGGTTCGGGTCCTCTTCCGAGTTGCTCGAGTCAACGGGGCGGAGACTCGCGGACTTCGCGAGTTCACTCGGGTTGCCGTTCGAGTTCCATCCGCTGGAGGGCAAAATCGGAAATATAACCGACCTGAGTCAACTCGGTGTGAGACCCAACGAGGCCATAGTAGTCCATTGGATACACCATTGCTTGTACGATATTACTGGGAGCGATTCAGGGACGTTGAGATTGTTGACTTTGCTGAGGCCGAAGCTGATCACAACCGTTGAACAGGATCTGAGCCACGCGGGGAGTTTTCTTGTGAGGTTCGTGGAGGCCTTGCATTATTATAGTGCGTTGTTCGACGCGCTGGGCGATGGATTGAGTGTGGACAGTACGGAAAGGCACACAGTGGAGCAGCAGTTGTTTGGGTGCGAGATAAGGAACATTGTGGCCGTGGGTGGACCCAAGAGAACTGGGGAGGTGAAAGTGGAGAGATGGGGCGAAGAGTTGAGTCGGGTCGGGTTTAGACCCGTTTCTCTAGGGGGAAACCCGGCTGCCCAGGCCAGTTTGTTGCTGGGGATGTATCCTTGGAGAGGATACACGCTGGTGGAGGAGAATGGGTGCCTCAAGTTGGGGTGGAAGGATCTTTCTCTGTTGACCGCCTCTGCTTGGCGGCCGTCTGATTAG 1341 0.5548 MLQSLVPRSSLSANLKGSSSMKTKRVDRDLDDSDDPSSFKRPTSGRNFSGEASVSGEKTMEEGEGHEEEPPFGGTESAGLRLLGLLLQCAECVAMNNFDGASDLLPEIAELSSPYGTSPERVGAYFAHALQARVFSSCLESYSPLITKSLTLSQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDCVHLIDFDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLESTGRRLADFASSLGLPFEFHPLEGKIGNITDLSQLGVRPNEAIVVHWIHHCLYDITGSDSGTLRLLTLLRPKLITTVEQDLSHAGSFLVRFVEALHYYSALFDALGDGLSVDSTERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGEELSRVGFRPVSLGGNPAAQASLLLGMYPWRGYTLVEENGCLKLGWKDLSLLTASAWRPSD 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1043 446 MobiDBLite consensus disorder prediction 1 74 - -
Glsi06g1043 446 Pfam GRAS domain family 84 443 IPR005202 -
Glsi06g1043 446 MobiDBLite consensus disorder prediction 1 20 - -
Glsi06g1043 446 MobiDBLite consensus disorder prediction 57 71 - -
Glsi06g1043 446 ProSiteProfiles GRAS family profile. 73 443 IPR005202 -
Glsi06g1043 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 64 438 IPR005202 -
Glsi06g1043 446 MobiDBLite consensus disorder prediction 21 39 - -
Glsi06g1043 446 MobiDBLite consensus disorder prediction 40 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1043 Glsi-ChrGlsi06 13836895 13838235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1043 21 443 GRAS Transcription Factor Family AT5G41920 65.962 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi06g1043 GRAS 1e-112 CL0063