Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1030 ATGCTCACGTGCACGAGAATGCTAGCAAGTCAGCAGCATCTTCTTTGTCTGAATCTGCCTGTGAAGCCTTGCAATTGCAACGTAATAAGGCTGAGTGTGTCAGAAACTTCTGACACCGCCTTAATCTCTCCTTTTTCCTCTCCTCTCTCTATCGTTGGGTTGATGCGTAATTGGCAAGAGAATTGTGTTTCTGGGTTTCGCTTTGCCTCGGCCGAAAAGCATTTGCTTTTTACAGAGACCCACTTGAAAGTTGAAGCTCATGTGACAATGGAAGCTAAGCCTCTTCGAGTTGTTCCCTCCTCAGACGACAGAGCCGGCGAAGGAGGTGGACCCCAGAAGAAAATTGACAGGGGCAGAAGTAGGACGATGGATGGTTTTGAAGAGAAGAGGGGTTTGGTGGTCAAGGAAGAGTATTCGGCTATTAAACTTGGTCTCGGAGTTGGTGCTTACTCTGCAGCAATAAACCCTGTGGTCGCGCGCGAGAAGCCCATGTTTACGGAGGCACAGAGGCGGGAGCTCGAACATCAAACTTTCATCTTCAAGCACTTTGCATTGAACGTTCCTGTTCCTCAGTACCTTGTGCTTCCCATTTTGGAAAGTTTGGCTGGCACTTCTGAGTCTGGCTTTGGTGTTAGATGGTTCAGTTCCCAGGGTTTTGGTTATGGGAATATGGATCCTGAACCCCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGCAGAGAAAAGGTAGTGCCCGATCAGAAGTACTGTGAGCGACACATGCACAGAGGTTGTAACCGTTCAAGAAAGCCTGTGGAAACATCTGAAGTTAACTCTTCTTTCTTAACAAAGCCATCTGGCAAGTTACATCCCAAGCTAAGCTCAAACACTAAATCTGCAGTTCCAGTTCTGGTTCCAAATCCTTTAGGCACTCAGCTCATTGACACATCTATCTTTACTACTTCTAGCAGCCCCTGTACCATTGAGACCTTTTCTACTAATAGATGCAAGAGTAGCATAAGCTCTGCTGGCACCCAAGCCTCCATTTCTCCAGCTTCTGTGGTAGACGCCAGCTCCACTTTTGCCACTGTAGCTGTCCCTCAGGTCACCACTATCAGCAGCATGACATCCATTGCTGCCAACAACAAAAGTTACCTTAATTTCTGTAAAAAAGATGACATTTCCAAGAGCTGCACCAGCCATGGTAGCATTGGAGTTCGAAGCAGTGGAGTAGGAAGCATCATTAATGATAGTAATATCTCTACCAGAATAGGTTTCTCCCCAAGGAGTGTTCTTCAAGCTATTACTGTTTCCAGTGGCCATCATTCGGGCATCATTGATGGAAACAATACAGAACTTGAACCAGGTAGGTGTCGGAGAACAGATGGTAAGAAGTGGCGGTGCCGGAGTGCAGTTCTTCCTGATCAGAAGTATTGTGGCACGCATATGCACCGAGGTGCTAAAAAGCGTTTTGCAGACCATGAACCATCTACCAATCCTCTCACTTCTGCTGTAACAATTGCTCGGTTGCCTCCCACTGCAGCCAAACCAAACATTCATAAAGCATACTATACAGTTCCAAACATAAATCTTTCCATGTCAATCCCTGCTTGTGCACCATTGACACAATGTAAAGAGGAAAATCCTAGCAGCAGCAGTGACACCGATACCACCATCAGTGACACCATGAACGACTATAGCCATGCTTCTTTTCCAGAAACTGTTTCAAAGCTTGCACCCGTCTAA 1731 0.4627 MLTCTRMLASQQHLLCLNLPVKPCNCNVIRLSVSETSDTALISPFSSPLSIVGLMRNWQENCVSGFRFASAEKHLLFTETHLKVEAHVTMEAKPLRVVPSSDDRAGEGGGPQKKIDRGRSRTMDGFEEKRGLVVKEEYSAIKLGLGVGAYSAAINPVVAREKPMFTEAQRRELEHQTFIFKHFALNVPVPQYLVLPILESLAGTSESGFGVRWFSSQGFGYGNMDPEPHRCRRTDGKKWRCREKVVPDQKYCERHMHRGCNRSRKPVETSEVNSSFLTKPSGKLHPKLSSNTKSAVPVLVPNPLGTQLIDTSIFTTSSSPCTIETFSTNRCKSSISSAGTQASISPASVVDASSTFATVAVPQVTTISSMTSIAANNKSYLNFCKKDDISKSCTSHGSIGVRSSGVGSIINDSNISTRIGFSPRSVLQAITVSSGHHSGIIDGNNTELEPGRCRRTDGKKWRCRSAVLPDQKYCGTHMHRGAKKRFADHEPSTNPLTSAVTIARLPPTAAKPNIHKAYYTVPNINLSMSIPACAPLTQCKEENPSSSSDTDTTISDTMNDYSHASFPETVSKLAPV 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1030 576 SMART QLQ_2 163 199 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi06g1030 576 Pfam QLQ 165 197 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi06g1030 576 MobiDBLite consensus disorder prediction 540 561 - -
Glsi06g1030 576 ProSiteProfiles WRC domain profile. 447 492 IPR014977 -
Glsi06g1030 576 MobiDBLite consensus disorder prediction 107 121 - -
Glsi06g1030 576 MobiDBLite consensus disorder prediction 97 121 - -
Glsi06g1030 576 Pfam WRC 449 485 IPR014977 -
Glsi06g1030 576 Pfam WRC 226 268 IPR014977 -
Glsi06g1030 576 PANTHER GROWTH-REGULATING FACTOR 5 434 546 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi06g1030 576 ProSiteProfiles QLQ domain profile. 164 199 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi06g1030 576 ProSiteProfiles WRC domain profile. 225 269 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1030 Glsi-ChrGlsi06 13714508 13717740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1030 163 485 GRF Transcription Factor Family AT2G45480 32.432 1.49e-34 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Glsi06g1030 WRC 1.1e-18 No_clan