Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1027 ATGGTTTCACAAAATCAATCCAAAGAAGACAACCCGAAGAAGCAATGGTCCTTGCGAGACTTCGAGATCGGAAAACCTCTTGGAAAAGGGAAATTCGGTAGAGTCTATGTTGCTAGAGAAGTCAAGAGCAAATATGTTGTGGCATTGAAGGTTATCTTTAAGGAACAAATAGACAAATACAGAATTCACCATCAACTGAGGAGAGAGATGGAGATTCAGACCAGTCTTAACCACCCAAACGTCCTGCGTCTCTATGGTTGGTTTCATGATGCTGAACATGTTTTCTTGATACTTGAATATGCTCATAATGGTGAGCTTTACAAGGAGCTCAGAAAAAAAGGTCATCTCACTGAGAAGCAAGCTGCCACGTATATTCTGAGCCTCACAAAGGCATTGGCATATTGTCATGAGAAGTATGTGATTCATAGGGATATTAAGCCTGAGAACTTGTTACTTGACCATGAGGGTCGCCTTAAAATTGCAGACTTTGGTTGGTCTGTACAGTCAAGAAGTAAGAGACACACCATGTGTGGAACATTGGATTATTTAGCACCAGAAATGGTAGAAAATAAAGCTCATGATTATGCAGTTGATAACTGGACTTTGGGTATCCTTTGTTATGAGTTCCTCTATGGTGTTCCCCCATTTGAGGCTGAGAGCCAATCCGATACCTTCAAAAGAATAATGACGGTTGACTTGAGCTTCCCTTCCAGCCCTTCTGTTTCTTCTGACGCCAAAAATCTGATTAGTCGGCTTTTGGTGAAAGACTCCTCAAGAAGGCTATCACTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCTGATCCCAGGGGCGTTTGCAATAATTAG 855 0.4152 MVSQNQSKEDNPKKQWSLRDFEIGKPLGKGKFGRVYVAREVKSKYVVALKVIFKEQIDKYRIHHQLRREMEIQTSLNHPNVLRLYGWFHDAEHVFLILEYAHNGELYKELRKKGHLTEKQAATYILSLTKALAYCHEKYVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGVPPFEAESQSDTFKRIMTVDLSFPSSPSVSSDAKNLISRLLVKDSSRRLSLQKIMEHPWIIKNADPRGVCNN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1027 284 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Glsi06g1027 284 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Glsi06g1027 284 Pfam Protein kinase domain 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1027 284 SUPERFAMILY Protein kinase-like (PK-like) 13 276 IPR011009 -
Glsi06g1027 284 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 6 283 IPR030616 GO:0004672
Glsi06g1027 284 CDD STKc_Aurora 20 272 - -
Glsi06g1027 284 PIRSF ILK 1 275 - -
Glsi06g1027 284 ProSiteProfiles Protein kinase domain profile. 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1027 284 FunFam Aurora kinase A 13 104 - -
Glsi06g1027 284 FunFam Serine/threonine-protein kinase ark1 13 283 - -
Glsi06g1027 284 SMART serkin_6 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1027 284 Gene3D Transferase(Phosphotransferase) domain 1 105 280 - -
Glsi06g1027 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1027 Glsi-ChrGlsi06 13663530 13667286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1027 21 278 CBL-interacting serine-threonine protein kinases AT5G10930 40.377 4.99e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Glsi06g1027 Pkinase 3.4e-75 CL0016