Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1024 ATGGACTTCTACACTCTTTTGACCTTCACTACCTTGTCGTTTCTGTGCCTCTTTCTAACCTTTTCTCTCCTCATCATCCTCACCATGTTCGTCGGAAAATCGATCGGCGACCCGAAATACTCCCCAGTGAAAGGCACGGTGTTCCACCAGCGCTTCTACTTCACCAACCTCTACGATCACCAGACGGACATGGCAAAAAACCTGCCAACTTTCCGGCTTCTGACTCCACGAACGAGCGAACTGTACACCACCGATACACGAAACATCGAACACGTTCTGAAAATCCAGTTCGACAAGTACTCCAAAGGCAAGTATAATCAAGAGATTTTGAAAGATCTTTTTGGTTTGGGGATTTTCGCCGTCGATGGCGATAAGTGGAGGCAGCAGAGGAAGCACGCGAGTTATGAGTTTTCCACGAGGGTTCTTAGGGATTTTAGCTGCGATGCTTTCCGAAGGAACGCTGCTAAACTGGTTCGTGTTGTTTCCGGATTTTCCCAGGCCGGTCTGGCTTTTGATATGCAGGATGTACTAATGAGATGCACTTTGGACTCCATATTCAAAGTTGGGTTTGGAGTGGAACTGAATTGCTTAGAAGGATCAAACAAAGAGGGGAGTGAATTCATGAAGGCCTTTGATGATTCCAATTCTTTGGTTTATTGGCGATATGTGGATCCATTCTGGAAGCTCAAAAAATATCTCAACATTGGTTCTGAAGCCACCCTCAAGAAAAATGTCAAATTAATTGATGATTTCGTGCATGGAGTCATCAAGACCAAAAGACAACTCCAGGCAACGCAGCAGGATTATAATGATAAAGAGGACATACTTTCAAGGTTTCTAATGGAGAGCAAGAAGGAACCAACAACTATGAATGATCAATATCTGCGGGATATAATTCTGAACTTCATGATTGCTGGCAAAGACACAAGTGCAAACACTCTCTCATGGTTCTTTTACAGGCTGTGCAGGCACCCTCTTGTGCAGGACAAGATTGTACAAGAAGTGAGGGATGTCACTTGCAGCCAGGAAAGTGAACCACCCAACATAGATGAGTTTGTGGCCAATTCAACAGATGCCACCCTTGAGAAAATGCATTATCTTCATGCAGCACTTACAGAGACCTTAAGGCTGTACCCTGCTGTTCCTATGGATGGGAGGACTGCAGAAGCACCTGACATCCTCCCTGATGGCTACAGACTGAAGAAAGGGGATGGAGTGAACTACATGGCCTATGCTATGGGCCGCATGTCTTACATTTGGGGTGAGGATGCTGAGCAGTTTCGCCCCGAAAGATGGCTCAAAAATGGAGTTTTTCAACCTGAATCTCCATTCAAATTCATAGCTTTCCATGCTGGACCTCGTATCTGCTTAGGGAAGGACTTTGCGTACAGACAGATGAAAATAGTATCAATGGCTCTTCTTCGTTTCTTTAGATTCAAATTGGAAAATGAAACAGGGAATGTAACTTACAAGACCATGTTTACACTTCACATTGACAAGGGCCTTCCTCTATGTGCAGTGCCAAGGTCTTGA 1533 0.4475 MDFYTLLTFTTLSFLCLFLTFSLLIILTMFVGKSIGDPKYSPVKGTVFHQRFYFTNLYDHQTDMAKNLPTFRLLTPRTSELYTTDTRNIEHVLKIQFDKYSKGKYNQEILKDLFGLGIFAVDGDKWRQQRKHASYEFSTRVLRDFSCDAFRRNAAKLVRVVSGFSQAGLAFDMQDVLMRCTLDSIFKVGFGVELNCLEGSNKEGSEFMKAFDDSNSLVYWRYVDPFWKLKKYLNIGSEATLKKNVKLIDDFVHGVIKTKRQLQATQQDYNDKEDILSRFLMESKKEPTTMNDQYLRDIILNFMIAGKDTSANTLSWFFYRLCRHPLVQDKIVQEVRDVTCSQESEPPNIDEFVANSTDATLEKMHYLHAALTETLRLYPAVPMDGRTAEAPDILPDGYRLKKGDGVNYMAYAMGRMSYIWGEDAEQFRPERWLKNGVFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSMALLRFFRFKLENETGNVTYKTMFTLHIDKGLPLCAVPRS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1024 510 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 SUPERFAMILY Cytochrome P450 38 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 CDD CYP86A 69 502 - -
Glsi06g1024 510 Gene3D Cytochrome P450 33 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1024 510 PANTHER CYTOCHROME P450 24 502 - -
Glsi06g1024 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Glsi06g1024 510 Pfam Cytochrome P450 41 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1024 Glsi-ChrGlsi06 13521538 13536383 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1024 1 510 Cytochrome P450 AT2G45510 61.373 0.0 672