Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1022 ATGGACTTCTTCTTCACTCTTTTGACCTTCACTGCCTTCTCGTTTCTGTGCCTCTTTCTAACCTTTTCTCTCCTCATCATCCTCACCATGTTCGTCGGAAAATCCATCGGCGACCCGAAATACTCCCCAGTGAAAGGCACGGTATTCCACCAGCTCTTCTACTTCACCAACCTCTACGATCACCAGACGGACATGGCAAAAAACCTGCCAACTTTCCGGCTTCTGTCTCCTGGAATGAGCGATCTGTACACCACCGATACACGAAACATCGAACACGTTCTGAAAATCCAGTTCGACAAGTACTCCAAAGGCAAGTATAATCAAGAGATTGTGACAGATCTTTTTGGTTTGGGGATTTTCGCCGTCGATGGCGATAAGTGGAGGCAGCAGAGGAAGCTCGCGAGTTATGAGTTTTCCACGAGGGTTCTTAGGGATTTTAGCTGCGATGCTTTCCGAAGGAACGCTGCCAAACTGGTTCGTGTTGTTTCCGGATTTTCCCAGGCCGGTCTGGCTTTTGATATGCAGGATGTACTAATGAGATGCACTTTGGACTCCATATTCAAAGTTGGGTTTGGAGTGGAACTGAACTGCTTAGAGGGATCAAACAAAGAGGGGAGTGAATTCATGAAGGCCTTTGATGATTCCAATGCTTTGGTTTATTGGCGATATGTGGATCCATTCTGGAAGCTCAAAAAATATCTCAACATTGGTTCTGAAGCCACCCTCAAGAAAAATGTTAAATTAATTGATGGTTTCGTGCATGGAGTCATCAAGACCAAAAGACAACTCCAGGCAACGCAGCAGAATTATAATGATAAAGAGGACATACTTTCAAGGTTTCTAATGGAGAGCAAGAAGGATCCAACAACTATGAATGATCAATATCTGCGGGATATAATTCTGAACTTCATGATTGCTGGCAAAGACACAAGTGCAATCACTCTATCCTGGTTCTTCTACATGCTGTGCAAGCACCCTCTTGTGCAGGACAAGATTGTACAAGAAGTGAGGGATGTCACTTGCAGCCAGGAAAGTGAACCACCCAACATAGATGAATTTGTGGCCAATTTAACTGATGCCACCCTTGAGAAAATGCATTATCTTCATGCAGCACTTACAGAGACCTTAAGGCTGTACCCTGCTGTTCCTATAGATGGGAGGACTGCAGAAGCACCTGACATCCTCCCTGATGGCTACAGGCTGAAGAAAGGGGATGGAGTGAACTACATGGCCTATGCTATGGGCCGCATGTCTTACATTTGGGGTGAGGATGCTGAGCAGTTTCGCCCCGAAAGATGGCTCAAAAATGGAGTTTTTCAACCTGAATCTCCATTCAAATTCATAGCTTTCCATGCTGGGCCTCGTATCTGCTTAGGGAAGGACTTTGCGTACAGACAGATGAAAATAGTATCAATGGCTCTTCTTCGTTTCTTTAGATTCAAATTGGAAAATGAAACAAGGAACGTAACTTACAAGACGATGTTTACACTTCACATTGACAAGGGCCTTCCTCTATGTGCAGTGCCAAGGTCTTGA 1536 0.4479 MDFFFTLLTFTAFSFLCLFLTFSLLIILTMFVGKSIGDPKYSPVKGTVFHQLFYFTNLYDHQTDMAKNLPTFRLLSPGMSDLYTTDTRNIEHVLKIQFDKYSKGKYNQEIVTDLFGLGIFAVDGDKWRQQRKLASYEFSTRVLRDFSCDAFRRNAAKLVRVVSGFSQAGLAFDMQDVLMRCTLDSIFKVGFGVELNCLEGSNKEGSEFMKAFDDSNALVYWRYVDPFWKLKKYLNIGSEATLKKNVKLIDGFVHGVIKTKRQLQATQQNYNDKEDILSRFLMESKKDPTTMNDQYLRDIILNFMIAGKDTSAITLSWFFYMLCKHPLVQDKIVQEVRDVTCSQESEPPNIDEFVANLTDATLEKMHYLHAALTETLRLYPAVPIDGRTAEAPDILPDGYRLKKGDGVNYMAYAMGRMSYIWGEDAEQFRPERWLKNGVFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSMALLRFFRFKLENETRNVTYKTMFTLHIDKGLPLCAVPRS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1022 511 Gene3D Cytochrome P450 33 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 CDD CYP86A 70 503 - -
Glsi06g1022 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Glsi06g1022 511 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 Pfam Cytochrome P450 55 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1022 511 PANTHER CYTOCHROME P450 25 503 - -
Glsi06g1022 511 SUPERFAMILY Cytochrome P450 39 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1022 Glsi-ChrGlsi06 13424344 13430620 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1022 5 511 Cytochrome P450 AT2G45510 62.919 0.0 688