Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1019 ATGGACTTCTTCACTCTTTTGACCTTCGCTACCTTCTCGTTTCTGGGTCTCTTTCTAACCTTTTCTGTCCTCATCATCCTCACCATGCTCCTCGGAAAATCCATCGGCGACCCGAAATACTCCCCGGTGAAAGGCACGGTGTTCCACCAGCTCTTCTACTTCACCAACCTCTACGATCACCAGACGGACATGGCAAAAAACCTGCCAACTTTCCGGCTTCTGGCTCCTGGAATGAGCGAACTGTACACCACCGATACACGGAACATCGAACACGTTCTGAAAATCCAGTTCGACAAGTACTCCAAAGGCAAGTATAATCAAGAGATTGTGACAGATCTTTTTGGTTTGGGGATTTTCGTCGTCGATGGCGATAAGTGGAGGCAGCAGAGGAAGCTCGCGAGTTATGAGTTTTCCACGAGGGTTCTTAGGGATTTTAGTTGCGATGCTTTCCGAAGGAACGCTGCCAAACTGGTTCGTGTTGTTTCCGGATTTTCCCAGGCCGGTCTGGCTTTTGATATGCAGGATGTACTAATGAGATGCACGTTGGACTCTATATTCAAAGTTGGGTTTGGAGTGGAACTGAATTGCTTAGAGGGATCAAACAAAGGGGGGAGTGAATTCATGAAGGCCTTTGATGATTCCAATGCTTTGGTTTATTGGCGATATGTGGATCCATTCTGGAAGCTCAAAAAATATCTCAACATTGGTTCTGAAGCCGCCCTCAAGAAAAATGTCAAATTAATTGATGATTTCGTGCATGGAGTCATCAAGACCAAAAGACAACTCCAGGCAACGCAGCAGGATTATAATGATAAAGAGGACATACTTTCAAGGTTTCTAATGGAGAGCAAGAAGGATCCAACAACTATGAATGATCAATATCTGCGGGATATAATTCTGAACTTCATGATTGCTGGCAAAGACACAAGCGCAAACACTCTATCATGGTTCTTCTACATGCTGTGCAAGCACCCTCTTGTGCAGAACAAGATTGCACAGGAAGTGAGAGATGTCACTTGCAGCCAGGAAAGTGAACCACCCAACATAGATGAGTTTGTGGCCAATTTAACAGATGCCGCCCTTGAGAAAATGCATTATCTTCATGCAGCACTTACAGAGACCTTAAGGCTGTACCCTGCTGTTCCTATAGATGGGAGGACTGCAGAAGCACCTGACATCCTCCCTGATGGCTACAGACTGAAGAAAGGGGATGGAGTGTACTACATGGCCTATGCCATGGGCCGCATGTCTTACATTTGGGGTGAGGATGCTGAGGAGTTTCGCCCCGAAAGATGGCTCAAAAACGGAGTTTTTCAACCTGAATCTCCATTCAAATTCATAGCTTTCCATGCTGGGCCTCGTATCTGCTTAGGGAAGGACTTTGCGTACAGACAGATGAAAATAGTATCAATGGCGCTTCTTCGCTTTTTCAGATTCAAATTGGAGAATGAAGCAAGGAATGTAACTTATAAGACCATGTTTACACTTCACATAGACAAGGGCCTTCCTCTATGTGCAGTGCCAAGTTCTTGA 1533 0.454 MDFFTLLTFATFSFLGLFLTFSVLIILTMLLGKSIGDPKYSPVKGTVFHQLFYFTNLYDHQTDMAKNLPTFRLLAPGMSELYTTDTRNIEHVLKIQFDKYSKGKYNQEIVTDLFGLGIFVVDGDKWRQQRKLASYEFSTRVLRDFSCDAFRRNAAKLVRVVSGFSQAGLAFDMQDVLMRCTLDSIFKVGFGVELNCLEGSNKGGSEFMKAFDDSNALVYWRYVDPFWKLKKYLNIGSEAALKKNVKLIDDFVHGVIKTKRQLQATQQDYNDKEDILSRFLMESKKDPTTMNDQYLRDIILNFMIAGKDTSANTLSWFFYMLCKHPLVQNKIAQEVRDVTCSQESEPPNIDEFVANLTDAALEKMHYLHAALTETLRLYPAVPIDGRTAEAPDILPDGYRLKKGDGVYYMAYAMGRMSYIWGEDAEEFRPERWLKNGVFQPESPFKFIAFHAGPRICLGKDFAYRQMKIVSMALLRFFRFKLENEARNVTYKTMFTLHIDKGLPLCAVPSS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1019 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 CDD CYP86A 69 502 - -
Glsi06g1019 510 PANTHER CYTOCHROME P450 26 502 - -
Glsi06g1019 510 Pfam Cytochrome P450 54 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 SUPERFAMILY Cytochrome P450 38 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Glsi06g1019 510 Gene3D Cytochrome P450 32 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1019 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1019 Glsi-ChrGlsi06 13298467 13304615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1019 1 510 Cytochrome P450 AT2G45510 61.961 0.0 682