Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1018 ATGGATTTTCTCTCGAACCCCTTTTTCATTGCAGCCTCAACTGCGATTTTAGCTCTCTTGACGGTTCAGTTTCTCTCGAGAAAATTGAAGGAAAGCCAAAGAAAGAAGTACCCTCCTGTTGCTGGTACTATATTCAATCAGCTGCTGAACTTCAATAGGCTGCACCACTATATGACTGATCTTGCTTGCAAGTACAGGACTTACAGGTTGATCACCCCTTTTAGAAATGAGATTTATACCGCAGACCCAGCTAATGTCGAGTATATTCTCAAGACCAAATTCGAGAATTTCGGGAAGGGGTCATACAACTACCACAATTTGAGGGATTTACTAGGAGATGGGATTTTCACTGTTGATGGTGAGAAATGGCGTGAACAGAGGAAGATAGCAAGCCATGAATTCTCGACAAAGATGCTAAGAGAGTTCAGTATTGAAATTTTCAGGAAAAATGCAGCAAAACTAGCAAATATAGTATCTGAAGCTGCAGCTTCTAATCAGATACTGGAAATTCAAAACCTATTTATGAGATCAACTTTGGATTCAATTTTCCAAGTTGCATTTGGAACTGAATTAGACAGCATGTGTGGATCAAGTGAAGAAGGGAAGAAGTTTGCTGATGCTTTTGATCTCTCAAGTGAATTGACCCTTTTTCGTTATGTTGATGTCTTCTGGAGGTTAAAGAAATTTCTAAATATTGGATCAGAGGCCCGATTAAGAGAGAACACACAAATTTTAAATGAGTTTGTATATAAGCTAATCAATGCCAGAATTCAGCAGTTGCAGATGTCAAGGGATGATTCTGCTAATAAAAGAGGAGATATTCTCTCCAGGTTTCTGGGAGCAAATGATTTTGATACGACATATTTAAGAGATATAATTCTTAACTTTGTCATTGCTGGCAAGGACACAACAGGTGCTACACTTGCCTGGTTCATTTACATGCTATGTAAGTATCCTGCTGTACAAGAAAAGGTTGCAGAAGAAGTGAAAGGACCAATGAACAAAAAAGAAATTACTAGCTATACAGAATTTGCATCTAGTGTAACAGATGAAGCTCTTGAAAAGATGAATTATCTCCATGCAACAATTACTGAAACTCTCAGACTCTATCCTGCAGTTCCAGTGGATGCAAAGATATGCTTTTCAGATGATACATTGCCAGATGGATATAGTGTGAAAAAAGGAGATATGGTAGCATATCAACCTTATGCAATGGGTAGGATGAAATTTATATGGGGAGATGATGCGGAGGAATTTAGACCAGAGAGATGGCTTGATGAGAATGGCATTTTTCAACCAGAGAGCCCTTTCAAGTTTACCGCTTTCCAGGCAGGTCCCCGGATTTGTTTAGGAAAAGAGTTTGCTTATAGACAGATGAAGATATTCTCTGCAGTCTTGTTAGGTTGTTTCCGCTTTGAATTGAATGGTGAGAGGAAAACTGTCACTTATAGGACAATGATAAATCTTCATATCGATGGAGGTCTTGAAGTCCAAGCCTTCCACAGACATGGGAATTAG 1518 0.3887 MDFLSNPFFIAASTAILALLTVQFLSRKLKESQRKKYPPVAGTIFNQLLNFNRLHHYMTDLACKYRTYRLITPFRNEIYTADPANVEYILKTKFENFGKGSYNYHNLRDLLGDGIFTVDGEKWREQRKIASHEFSTKMLREFSIEIFRKNAAKLANIVSEAAASNQILEIQNLFMRSTLDSIFQVAFGTELDSMCGSSEEGKKFADAFDLSSELTLFRYVDVFWRLKKFLNIGSEARLRENTQILNEFVYKLINARIQQLQMSRDDSANKRGDILSRFLGANDFDTTYLRDIILNFVIAGKDTTGATLAWFIYMLCKYPAVQEKVAEEVKGPMNKKEITSYTEFASSVTDEALEKMNYLHATITETLRLYPAVPVDAKICFSDDTLPDGYSVKKGDMVAYQPYAMGRMKFIWGDDAEEFRPERWLDENGIFQPESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFELNGERKTVTYRTMINLHIDGGLEVQAFHRHGN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1018 505 Gene3D Cytochrome P450 25 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 Pfam Cytochrome P450 42 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 PANTHER CYTOCHROME P450 25 496 - -
Glsi06g1018 505 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1018 505 CDD CYP86A 66 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1018 Glsi-ChrGlsi06 13286719 13291182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1018 1 502 Cytochrome P450 AT2G45510 50.098 0.0 520