Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1012 ATGCCATCACGTCAGCCCCCACCACCTACGGCGGCGGCGCTAGCTACAGACACTCCGACCATCCACCATCACAACCATCACCACCACCAATTAATCCTTGGCGGAGTTCTTGGCCTTGCTTTCCTGTTTCTAATCGTCATCGTCTTCCTCACAATTTTCCTCTACCGCAAGCTCTCCTATAACCGCACCGCCCCATTTGATCACTACAACCACCACCAGCACCGGCGTTTCTCCTACTCTCTTCTTCGACGCGCCACTAACTCCTTCTCGCCATCCACCAAGCTCGGCCATGGTGGGTTTGGCTCCGTTCACAAGGCCACCCTTCCCTCGGGTCAGTCCGTGGCTCTCAAACTCATGGATTCCCCTGGCTCGCTGCAAGGCGAGCGTGAGTTCCACAACGAGCTCTCACTCTGTTCCCAACTCAACTGCCCTTATATACTCTCCCTTCTGGGTTTCTCTTCTGATCGCCGTGGCCGTAAACTAATCTTGGTTTATGAGCTTATGCCCAATCGCAGTTTACAGGACGCGTTGTTGGATAGGAAGTGCGAGGAGCTCATGGAGTGGAAGAAGAGGTTCGACATCGCTGTTCACATCTCGAAGGGTCTCGAATACCTTCACCACTATTGCAACCCGCCCGTGATTCATGGGGATATTAAGCCAAGTAATGTGTTGCTGGATTCCGATTTCTCTGCCAAGATTGGAGATTTCGGGCTCGCCAGGTTGAAAACAGAGGATCTGGAAATGGTGGAGGAAAATGGGGGAGAGGGTGAGTGCGCGAAGCAGGAGAAGGATGGAGTCGTGGACTTGGGGGATGACCACGGGTCGATTTTGGAAGAGGCAGAGAGTGTTATGACTGGGTTTGAAGAATGTAGTGGAGTGGTGGATCGGTCGCCGGAGAGTTGCACGGTTAGGATTTTGGATTCGGAAGCTTCACCGGAGACTATTTCGCTGTCGCCGGAAGTGGGGGTCGATAAATCGAGTGTATCAGAAGCGTGCTTTGATAAATTTAGCATTGATAGTGGGAAAGATTTGATTGGTAATAATCGGAAGAAGGGTGGTTCGGGAAGGGATTGGTGGTGGAAGCAGGACAATGGAGGAGGGTCCGAATCTGGCAGGGTGAAAGACTATGTGATGGAGTGGATCGGGAGTGAGATAAAAAAGGAGAGGCCTAAAAGCGAGTGGATTGCATCTCCCAGCTCGGTGGGTACAAGCACGCCAGCCCCAAAATTGGAGTCGAAGAAGCAGAGGAAGAGATTGGATTGGTGGGCATCACTTGATGAAGAAAAAGTTAAGAAGAAGGAGAAGAACCGGAAGCCAAGAGAGTGGTGGAAGGAGGAGTTCTGTGAGGAGCTCTCAAAGAAGAAGAAAAAGAGAAGCCTTGATTCAAATTGCGGCGGGGAATCATGGTGGCAGAAAGACGAGGATTTGTTACCAGAGAAGAAGAAGAAGAAGAGGAAGAGCAAGAGTAGCAGAGGCAGCATTGATTGGTGGTTGGATAGTTTGAGTGGGGAGCTCAGAAATGGCAGAAGAAATAGCCAGGATTGGGTTAGTGGGGATATACCCAAGAGTGGTGGAATCAGCAGCACACCAAGTATGAGAGGAACTGTTTGTTATATTGCTCCTGAATATGGTGGTGGTGGGCAACTCTCTGAGAAGTGTGATGTCTATAGTTTTGGTGTTCTACTTTTGGTTTTGATCGCAGGAAGACGACCTCTTCAAGTAACAGCCTCCCCAATGTCAGAATTTGAAAGGGCTAATCTCATTTCGTGGGCTCGGCAACTTGCCCACAATGGGAAGCTTTTAGATCTTGTTGACCCTTCCATTCATTCATTAGACAAGGAGCAGGTATTGCTCTGCATCACAATTGCGTTGTTATGTCTACAGAGATCGCCTGCAAAGCGACCTACCATGAAAGAGATCGTAGGCATGCTTTCTGGTGAGGCTGAGCCACCCCACTTGCCTTTTGAGTTTTCCCCATCACCCCCTTCCAATTTTCTGTTCAAGTCTCGAAAGAAGGCTCGGTGA 2025 0.5002 MPSRQPPPPTAAALATDTPTIHHHNHHHHQLILGGVLGLAFLFLIVIVFLTIFLYRKLSYNRTAPFDHYNHHQHRRFSYSLLRRATNSFSPSTKLGHGGFGSVHKATLPSGQSVALKLMDSPGSLQGEREFHNELSLCSQLNCPYILSLLGFSSDRRGRKLILVYELMPNRSLQDALLDRKCEELMEWKKRFDIAVHISKGLEYLHHYCNPPVIHGDIKPSNVLLDSDFSAKIGDFGLARLKTEDLEMVEENGGEGECAKQEKDGVVDLGDDHGSILEEAESVMTGFEECSGVVDRSPESCTVRILDSEASPETISLSPEVGVDKSSVSEACFDKFSIDSGKDLIGNNRKKGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKSEWIASPSSVGTSTPAPKLESKKQRKRLDWWASLDEEKVKKKEKNRKPREWWKEEFCEELSKKKKKRSLDSNCGGESWWQKDEDLLPEKKKKKRKSKSSRGSIDWWLDSLSGELRNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPLQVTASPMSEFERANLISWARQLAHNGKLLDLVDPSIHSLDKEQVLLCITIALLCLQRSPAKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFLFKSRKKAR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1012 674 PANTHER OS07G0586332 PROTEIN 1 674 IPR044576 -
Glsi06g1012 674 FunFam Os07g0541700 protein 168 253 - -
Glsi06g1012 674 MobiDBLite consensus disorder prediction 344 371 - -
Glsi06g1012 674 ProSiteProfiles Protein kinase domain profile. 89 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1012 674 SUPERFAMILY Protein kinase-like (PK-like) 66 662 IPR011009 -
Glsi06g1012 674 SMART serkin_6 89 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1012 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Glsi06g1012 674 MobiDBLite consensus disorder prediction 652 674 - -
Glsi06g1012 674 Gene3D Transferase(Phosphotransferase) domain 1 511 650 - -
Glsi06g1012 674 Gene3D Transferase(Phosphotransferase) domain 1 168 264 - -
Glsi06g1012 674 Pfam Protein kinase domain 92 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1012 674 Pfam Protein kinase domain 529 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1012 674 Gene3D Phosphorylase Kinase; domain 1 62 167 - -
Glsi06g1012 674 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Glsi06g1012 674 MobiDBLite consensus disorder prediction 391 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1012 Glsi-ChrGlsi06 13083275 13085299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1012 522 644 Receptor kinase-like Gene Family AT3G58690 38.760 3.10e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Glsi06g1012 Pkinase 1.2e-27 CL0016