Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0977 ATGGATAATTATGAGTCTTCATCTCCATACCGTTATCCCAACTCATATGGATACCATCCTCATAATCCTCCCCTTCCATACCCACCTCCAGGTTCAGATCCATATGGACCTCCTCCTTACCAATATTCATACAATCCTTCACAACCCTTGAACTGTTCCTACCCCCCACCTTTACCCGCTACTGGTCCCCATTCTGGCTCCTCGGACTATATACAAGCTCCAGTATCCTATTCTGGTCCTCTTCCTTTCCCTTACCTCCGTTTCCAAGTTCCTCCAGTGACTCATAGTCCTCCTCACCCCTCCCTTTCACATCCTACTGGTTTTCAGCGTGGACTATCTCCTCAACCACTAGTCGAGGGGTACCCGCCTCCTCCTGAAGACTGCATTCAAGGCCATTCATTTGCCCATAGTTTCTCTGGTCCCTTCGAGCCTCAGAACGCGAGCTCCGGAGGAGGTGGGTCATCACCATCATCATCATCACCATTGCAAATCAATGATGCTTCTTATTCAAACCCTCCTCATAGTTCTGCTCTCCCACTATCTTTGGAGGATGTCACGAGCAATGCTCGATTTTCTGACGAAATAAAATCTGCTCCTTCATCTTCCCCCTCAACTTCACAGCAGCAGCAGCCACTTAGGCATTCCATTTCTATTTCAAAGCATGATAATAATAAGCTTGTGGAGTTTTGTGGTCATCGTCGTAACTCCTTCTCGGGTTGGGGATCATCTTACTTTAGTCGGTTCGAATCTTCGAAACATTCAACTCATTCAGGCTCGTTTAACGATGTAAATCGTAGTAAGAATTTAGAGATTGTTCCTGTCTCGAGTAAAGGGTCCTTGAAAATCTTGCTTCTACATGGGAATCTAGATATACATGTTCATGGAGCAAAGAATCTTCCAAATATGGACATGTTCCACAGAACTTTCGGGGATATGTTTAGTAAGTTCCCTGGGAATGTGGGCAACAAGATTGAAGGAAGTATGACTGGGAAGATTACTAGCGATCCTTATGTAATAATTTCAGTAGCAAATGCTGTGGTTGGGAGAACGTTTGTGATTAGCAACTGTGAAGATCCTGTTTGGATGCAACATTTTTATGTTCCTGTTGCGCATTATGCTGCTGAAGTGTACTTCGTTGTTAAAGACAGTGATGTTGTGGGTTCCCAGCTCATAGGCAGCGTGGCAATTCCAGTGGAACAAATATACTCAGGAACAAAAGTAGAAGGTACCTACCCTGTCTTGAATAGTAGCGGGAGGCCTTGTAAGCAAGGTGCTACCTTGACACTATCCATCAGGTACGCTCCAATTGAGAAACTGGGTACTTATCATCAAGGAGTTGGAGCGGGCCCTGACTACTCTGGGGTTCCTGGCACATATTTTCCCCTTCGGAAAGGTGGAACTGTTACACTATATCAAGATTCTCATGTTCCAGATGGTATTCTCCCCCTCGTGATGCTTGACCAAGGGAAGTATTTTGTTCATAGGAAGTGTTGGCAAGAAATCTTTGAAGCCATAGGCCAAGCTCGGCGTTTGATTTATATTACAGGGTGGTCAGTGTGGCACAAAGTTAAGTTGGTAAGGGATGCTGGTTATATGGCTGATCTCACCCTCGGTGATCTTCTGAGGTCCAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGACCCTACGTCAAGGAATATCTTTGGTTACAAAACAGGTGGTGTCATGGCAACTCATGATGAGGAAACCCGACGTTTTTTCAAACACTCTTCTGTGCAAGTGCTGCTTTGTCCCCGCATTGCCGGAAAACGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACAGTTATTGTGGATGCTGATGCTGGGAATAACAAAAGAAAAATCATAGCATTTGTTGGCGGACTTGATTTGTGTGATGGGCGATATGATATCCCCCACCATCCACTCTTTAGGACACTCCAGACACTGCATAAGGATGACTATCACAACCCTACTTTCACGGGCAATACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAATTGAGGGTCCAGCAGCTTATGATGTTCTGGCCAACTTTGAGGAGCGCTGGTTAAAAGCTGCAAAACCTCGTGGGATTAAAAAGTTGAACAAATCATTTGATGATGCTTTGCTTAGGCTGGAAAGACTTCCAGACATTATTAGAATGTCTGATTCTAGTAATGTAAATGACAATGATCCTGAAGCTTGGCATGCTCAGATATTCCGATCAATTGATTCGAATTCTGTTAAGGGATTTCCGAAGGATCCAAAAGAGGCAACAAGTAAGAACCTAGTATGTGGGAAGAATGTACTGATTGACATGAGCATACATACAGCATATGTTAAGGCCATCCGTGCCGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGGTCTTCGTACAATTGGAGTCAATATAAAGACCTGGGTGCTAATAACTTAATTCCTATGGAAATTGCCCTAAAGATTGCAGCAAAGATAAAGGCAAATGAGAGATTTGCAGTATATATTATTATACCAATGTGGCCTGAGGGTGTTCCAACAGGAGCTGCCACGCAAAGGATTCTATTTTGGCAGCAAAAAACAATGCAAATGATGTATGAAACCATTTACAAGGCTTTGGTTGAGGCTGGGCTAGAAGCAGCATTCTCTCCACAAGACTATTTAAACTTTTTCTGTCTTGGTAATCGTGAGACGATCGATATGTATGATTTTACTGCAATGCTTGGAACTCCTCCTCCAGCAAATAGTCCACAAGCCTTTAGTCGAAATAGCCGGCGTTTTATGATTTATGTTCATTCAAAAGGCATGATTGTTGATGATGAATATGTCATATTGGGGTCTGCAAACATCAACCAACGCTCTATGGAAGGAACAAGAGACACTGAGATTGCAATGGGAGCCTACCAACCTTACTATACATGGGCAAGACAACATTCTTATCCACGTGGACAGATTCATGGATATAGGATGTCACTTTGGGCAGAACATACAGGAACACTTGAAGATTGCTTCTTGCAGCCAGAGAGCCTTGAATGTGTGAGAAGGTTAAGAGCAATGGGTGAAAGGAACTGGAATCAGTTTGCAGCAAATGATATAGCAGAGATCAGAGGGCACCTACTTAAATACCCAGTAGAAGTTGATCGAAGGGGCAAGGTTCGATCACTTCCTGGCCACGAAGAGTTCCCTGATGTGGGAGGAAAGATAGTTGGATCATTTCTTGCCATCCGGGAGAATCTAACGATTTGA 3306 0.4365 MDNYESSSPYRYPNSYGYHPHNPPLPYPPPGSDPYGPPPYQYSYNPSQPLNCSYPPPLPATGPHSGSSDYIQAPVSYSGPLPFPYLRFQVPPVTHSPPHPSLSHPTGFQRGLSPQPLVEGYPPPPEDCIQGHSFAHSFSGPFEPQNASSGGGGSSPSSSSPLQINDASYSNPPHSSALPLSLEDVTSNARFSDEIKSAPSSSPSTSQQQQPLRHSISISKHDNNKLVEFCGHRRNSFSGWGSSYFSRFESSKHSTHSGSFNDVNRSKNLEIVPVSSKGSLKILLLHGNLDIHVHGAKNLPNMDMFHRTFGDMFSKFPGNVGNKIEGSMTGKITSDPYVIISVANAVVGRTFVISNCEDPVWMQHFYVPVAHYAAEVYFVVKDSDVVGSQLIGSVAIPVEQIYSGTKVEGTYPVLNSSGRPCKQGATLTLSIRYAPIEKLGTYHQGVGAGPDYSGVPGTYFPLRKGGTVTLYQDSHVPDGILPLVMLDQGKYFVHRKCWQEIFEAIGQARRLIYITGWSVWHKVKLVRDAGYMADLTLGDLLRSKSQEGVRVLLLIWDDPTSRNIFGYKTGGVMATHDEETRRFFKHSSVQVLLCPRIAGKRHSWYKQKEVGTIYTHHQKTVIVDADAGNNKRKIIAFVGGLDLCDGRYDIPHHPLFRTLQTLHKDDYHNPTFTGNTGGCPREPWHDLHSKIEGPAAYDVLANFEERWLKAAKPRGIKKLNKSFDDALLRLERLPDIIRMSDSSNVNDNDPEAWHAQIFRSIDSNSVKGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQYKDLGANNLIPMEIALKIAAKIKANERFAVYIIIPMWPEGVPTGAATQRILFWQQKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNRETIDMYDFTAMLGTPPPANSPQAFSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPYYTWARQHSYPRGQIHGYRMSLWAEHTGTLEDCFLQPESLECVRRLRAMGERNWNQFAANDIAEIRGHLLKYPVEVDRRGKVRSLPGHEEFPDVGGKIVGSFLAIRENLTI 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0977 1101 Pfam Phospholipase D Active site motif 948 974 IPR001736 GO:0003824
Glsi06g0977 1101 Pfam Phospholipase D Active site motif 613 647 IPR001736 GO:0003824
Glsi06g0977 1101 MobiDBLite consensus disorder prediction 94 179 - -
Glsi06g0977 1101 MobiDBLite consensus disorder prediction 1 71 - -
Glsi06g0977 1101 Pfam Phospholipase D C terminal 1021 1091 IPR024632 -
Glsi06g0977 1101 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 612 647 IPR001736 GO:0003824
Glsi06g0977 1101 FunFam Phospholipase D 760 993 - -
Glsi06g0977 1101 Gene3D Endonuclease Chain A 759 1000 - -
Glsi06g0977 1101 SUPERFAMILY Phospholipase D/nuclease 453 711 - -
Glsi06g0977 1101 MobiDBLite consensus disorder prediction 193 217 - -
Glsi06g0977 1101 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 947 974 IPR001736 GO:0003824
Glsi06g0977 1101 MobiDBLite consensus disorder prediction 139 179 - -
Glsi06g0977 1101 Pfam C2 domain 287 413 IPR000008 -
Glsi06g0977 1101 SUPERFAMILY Phospholipase D/nuclease 781 1033 - -
Glsi06g0977 1101 FunFam Phospholipase D delta 488 726 - -
Glsi06g0977 1101 Gene3D C2 domain 282 428 IPR035892 -
Glsi06g0977 1101 MobiDBLite consensus disorder prediction 193 218 - -
Glsi06g0977 1101 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 285 435 IPR035892 -
Glsi06g0977 1101 ProSiteProfiles C2 domain profile. 268 411 IPR000008 -
Glsi06g0977 1101 SMART pld_4 947 974 IPR001736 GO:0003824
Glsi06g0977 1101 SMART pld_4 612 647 IPR001736 GO:0003824
Glsi06g0977 1101 MobiDBLite consensus disorder prediction 19 62 - -
Glsi06g0977 1101 PANTHER PHOSPHOLIPASE D 279 1092 IPR015679 -
Glsi06g0977 1101 SMART C2_3c 288 410 IPR000008 -
Glsi06g0977 1101 Gene3D Endonuclease Chain A 488 726 - -
Glsi06g0977 1101 CDD C2_plant_PLD 283 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0977 Glsi-ChrGlsi06 11550678 11580102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0977 277 1101 Phospholipase D Gene Family (Wang group) AT2G42010 77.321 0.0 1395