Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0975 ATGGCTGCTCTTCAGAAACGCGAGGTTGAAGAAGATCAACACCTGGGAGACGTTGATCTTAGACTTCACAGCGGCGGCGGAGGACCCGCGACGGCGGTCCAGGTGAAGGGGCCCAAAGAAGAGCCGGCTACGGAGGAGGGCTCGCAGGCGGCGATGCGGGTTATGCCGGTGGCAGTTCACGTGCCGGCGGGGATGTCTATGCTGGGAAAGCCGCAGCAGAAGCGGGCGTCGACGAAGGACCGTCACACGAAGGTGGAGGGGCGAGGACGGAGGATCCGAATGCCTGCCACGTGCGCTGCCCGGATCTTCCAATTGACCCGGGAACTGGGTCACAAGTCTGACGGGGAAACCATCCGGTGGCTCCTCGAACACGCGGAGCCCGCCATCATAGCCGCCACCGGCACCGGCACAATTCCCGCCATCGCCATGTCCGTTAATGGGACCCTCAAAATCCCAACCACCCCTTCCACCACCAATATTAACAACCCCACTAACAACTCCACCACCACCGACAATCCGGAACCCGGTGACCCACCCGGGAGGAAGAAACGAAAAAGACCAGCGAACAGTGGGTGCATAGACGTAAACGACGGCGTTTCAGTCTCTGCCGGCCTTGCCCCGACAACGATGATTACGACAAAGCCAACCACCACAATAATCCCTCCACAAGCAATTCCGCTAGCTCAAGGACTGGTCCCCATGTGGGCGATACCCTCAAACGCCGTCGTTCCAGCAGGGACGTTCTTCGTGGTCCCACCCATGCCCTCCATAGCCGGACCTTCAAACCAACCACAGCTTTTCACAGTCCCAGCCAATGCTACACCTCTGATCAACATCTCCGCGAGACCTATATCCGCTTTCATCTCGTCCATGGCTAACATCGTTGGGCCTGTTCAACCCCAAGCGAGCTCCACAACTACAACTGAATGTACAACCATGGCTCCGTCTTCGAAATCGCCAACCAAACCATCGGTTATGGCCCCGAGCTCAAGTTCTGGCGCTACCACAAGTACAACCCACATGCTCAGAGATTTCTCATTGGAGATTTACGACAAGCAAGAGCTTCAGCTCATGTCTCGCTCTTCGAAGCATTGA 1095 0.5735 MAALQKREVEEDQHLGDVDLRLHSGGGGPATAVQVKGPKEEPATEEGSQAAMRVMPVAVHVPAGMSMLGKPQQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTIPAIAMSVNGTLKIPTTPSTTNINNPTNNSTTTDNPEPGDPPGRKKRKRPANSGCIDVNDGVSVSAGLAPTTMITTKPTTTIIPPQAIPLAQGLVPMWAIPSNAVVPAGTFFVVPPMPSIAGPSNQPQLFTVPANATPLINISARPISAFISSMANIVGPVQPQASSTTTTECTTMAPSSKSPTKPSVMAPSSSSGATTSTTHMLRDFSLEIYDKQELQLMSRSSKH 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0975 364 MobiDBLite consensus disorder prediction 303 338 - -
Glsi06g0975 364 MobiDBLite consensus disorder prediction 176 190 - -
Glsi06g0975 364 MobiDBLite consensus disorder prediction 152 193 - -
Glsi06g0975 364 ProSiteProfiles TCP domain profile. 78 132 IPR017887 -
Glsi06g0975 364 MobiDBLite consensus disorder prediction 1 49 - -
Glsi06g0975 364 MobiDBLite consensus disorder prediction 69 88 - -
Glsi06g0975 364 MobiDBLite consensus disorder prediction 152 174 - -
Glsi06g0975 364 Pfam TCP family transcription factor 77 154 IPR017887 -
Glsi06g0975 364 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 350 IPR005333 GO:0003700
Glsi06g0975 364 MobiDBLite consensus disorder prediction 1 19 - -
Glsi06g0975 364 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0975 Glsi-ChrGlsi06 11543633 11544727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0975 1 364 TCP Transcription Factor Family AT2G45680 50.620 3.14e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi06g0975 TCP 1.3e-29 No_clan