Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0955 ATGTATTCCCCTGCCTCGCTGCAAGGCGAGCGTGAGTTCCACAACGAGCTTTCACTCTGTTCCCAACTCAACTGCACTTATATACTCTCCCTTCTGGGTTTCTCTTCTGATCGCCGTGGCCGTAAACTAATCTTGATTTATGAGCTTATGCCCAATCGCAGTTTACAGGAGGCGTTGCTGGATAGGAAGTGCGAGGAGCTCATGGAGTGGAAGAAGAGGTTCGACATCGCTGTTCACATCTCGAATACCTTCACCATCTCGAAGAGATCGCCTGCAAAGCGACCTACCATGAAAGAGATTGTAGGCATGCTTTCTGGTGAGGCTGAGCCACCCCACTTGCCTTTTGAGTTTTCCCCATCACCCCCTTCCAATTTTCTGTTCAAGTCTCGAAAGAAGGCTCGCAAAGTGGAGGATGCACTGTCCCTGGAAATGCGAGAAGTAGAACTTCATTTGGTCATCACAGTGCTAGGGTCCTACTAG 480 0.4958 MYSPASLQGEREFHNELSLCSQLNCTYILSLLGFSSDRRGRKLILIYELMPNRSLQEALLDRKCEELMEWKKRFDIAVHISNTFTISKRSPAKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFLFKSRKKARKVEDALSLEMREVELHLVITVLGSY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0955 159 Gene3D Transferase(Phosphotransferase) domain 1 2 86 - -
Glsi06g0955 159 PANTHER OS07G0586332 PROTEIN 88 134 IPR044576 -
Glsi06g0955 159 SUPERFAMILY Protein kinase-like (PK-like) 8 81 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0955 Glsi-ChrGlsi06 10990655 10991892 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0955 3 81 Receptor kinase-like Gene Family AT3G45860 39.241 7.76e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Glsi06g0955 None None None