Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0929 ATGGTGGATGATGGTAGTGATGGTGTAGCAGAATTTGATGCCCGTTCCATAGAAGAATGGTTGGTGCATGCCCAGGAACTTGTCCCTATTGCTCTTGATAAGGCTAAAGAGGTGAAGAATTTCCCTGGTAGGTGGAAGATGATCATTTCGAAGTTAGAACAGATCCCATCTCGTTTATCTGATTTATCTAGCCACCCCTGCTTCTCCAAGAACGCTCTTTGCAAGGAGCAATTGCAGGCAGTGTCAAAAACACTACGAGAAACCATTACTTTTGCTGAGCTATGTGTGAAGGAGAAGTATGAAGGTAAGCTTCGGATGCAGAGTGATCTCGATGCATTATCTGGTAAACTGGATTTGAACCTAAGGGATTGTGGCCTATTGATCAAAACCGGTGTTCTTGGTGAAGCCACTTTGCCATTGGCTATGGCTATGTCTGGTCCTATTGCAGAATCTGATGCAGCAACACACAACAACATAAGGGAACTACTTGCTCGGCTTCAGATCGGGCACTTGGAAGCAAAGCAAAAAGCTTTAGATAGCTTAGTTGAAGCTATGAAGGAAGATGAAAAGAGTGTATTAGCTGTTCTGAGTAGGAGCAACATTGCTGCTTTAGTTCAATTGCTTACAGCTACATCTCCCAGGATGAGGGAGAAAACTGTGAGTGTTATATGCTCTCTTGCAGAATCAGGCAGCTGTGAGAACTGGCTAGTTTCTGAAGGGGTTCTTCCACCTCTTATAAGGCTTATCGAATCAGGAAGTTCTTTGGGTAAAGAGAAGGCTGCAATATCCTTTCAGAGGTTGTCTATGTCATCAGAAACATCACGTGCCATTGTTGGACATGGAGGGGTTCGTCCATTGATTGAGCTATGCCAAACTGGTGATTCTGTGTCACAATCTGCAGCTGCTTGTACTCTGAAGAACATATCAGCAGTCCCTGAGGTTCGGAAAGTTCTAGCCGAAGAAGGGGCTGTGAGGGTCATGATCAGTCTCCTTAACTGTGGAATTTTATTGGGTTCTAAAGAGTATGCGGCTGAGTGCTTGCAGAATCTCACTGCAAGCAATGAGAATCTAAGAAGAGCAGTAATATCAGAAGGTGGTGTTAGAAGCCTTTTAGCTTATCTTGATGGTCCACTTCCCCAAGAATCTGCAGTTGCAGCATTGAGAAACTTAGTAGGATCAGTTTCTGAGCAAGTTCTGGTTTCTATGGGCTTTCTTCCACGCTTAGTTCATGTTCTAAAATCTGGGTCTATTGGTGCTCAGCAAGCTGCTGCATCTGCAATCTGCAAAATTTCCGGCTCAACTGAGATGAAGAAACTTGTTGGTGAAGCTGGGTTAATGCCTCTCCTTGTGAAGATGCTTGAGGCCAAGTCAAATAGTGCTAGAGAAATTGCTGCACAAGCAATTTCAAGTTTGATGACAGTGTCTCAGAATCAAAGAGAGGTCAAGAAGGATGGTAAAAGTGTGCCAAATCTGGTCCAATTGCTTGATCCCAGTCCACAGAACACAGCAAAGAAATATGCTGTTTCTTGCCTTGGATCACTCTCTTCAAGCCAGAAATGTAAGAAGTTGATGATTTCTTATGGGGCAATTGGGTATTTGAAGAAACTCTCAGAGATGGACATTCCAGGAGCTAAGAAACTACTAGAGAGATTGGAAAGAGGGAAGTTGAGAAGCTTATTTAGCAGAAAATAG 1692 0.435 MVDDGSDGVAEFDARSIEEWLVHAQELVPIALDKAKEVKNFPGRWKMIISKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLRETITFAELCVKEKYEGKLRMQSDLDALSGKLDLNLRDCGLLIKTGVLGEATLPLAMAMSGPIAESDAATHNNIRELLARLQIGHLEAKQKALDSLVEAMKEDEKSVLAVLSRSNIAALVQLLTATSPRMREKTVSVICSLAESGSCENWLVSEGVLPPLIRLIESGSSLGKEKAAISFQRLSMSSETSRAIVGHGGVRPLIELCQTGDSVSQSAAACTLKNISAVPEVRKVLAEEGAVRVMISLLNCGILLGSKEYAAECLQNLTASNENLRRAVISEGGVRSLLAYLDGPLPQESAVAALRNLVGSVSEQVLVSMGFLPRLVHVLKSGSIGAQQAAASAICKISGSTEMKKLVGEAGLMPLLVKMLEAKSNSAREIAAQAISSLMTVSQNQREVKKDGKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSSSQKCKKLMISYGAIGYLKKLSEMDIPGAKKLLERLERGKLRSLFSRK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0929 563 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 17 561 - -
Glsi06g0929 563 SUPERFAMILY ARM repeat 159 538 IPR016024 -
Glsi06g0929 563 Gene3D - 149 376 IPR011989 -
Glsi06g0929 563 Gene3D - 377 553 IPR011989 -
Glsi06g0929 563 Pfam Armadillo/beta-catenin-like repeat 397 431 IPR000225 GO:0005515
Glsi06g0929 563 Pfam Armadillo/beta-catenin-like repeat 271 310 IPR000225 GO:0005515
Glsi06g0929 563 Coils Coil 171 191 - -
Glsi06g0929 563 SMART arm_5 311 352 IPR000225 GO:0005515
Glsi06g0929 563 SMART arm_5 353 392 IPR000225 GO:0005515
Glsi06g0929 563 SMART arm_5 433 473 IPR000225 GO:0005515
Glsi06g0929 563 SMART arm_5 393 432 IPR000225 GO:0005515
Glsi06g0929 563 SMART arm_5 188 228 IPR000225 GO:0005515
Glsi06g0929 563 SMART arm_5 474 516 IPR000225 GO:0005515
Glsi06g0929 563 SMART arm_5 270 310 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0929 Glsi-ChrGlsi06 10451613 10453304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0929 209 487 U-box Gene Family AT3G54790 29.474 5.05e-19 89.4