Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0919 ATGAGTTTTGGGGGTTTTCTTGACGACAATTCCGGTGGTGGCGGTGGTGCGAGAATCGTAGCCGATACTCCTTACAGCAACGGCAGCATAAGCATCAACGATAATAATAGAATGCCCTCTGGTGCAATCTCACAGCCTCGCCTCGTCACTTCAACTTTGGCCAAATCAATGTTCAACTCTCCTGGGCTCTCTCTTGCACTACAAACGGATATAGATGGGCAGAGGGATGTGAATAGAATACCTGAAAATTATGAGCAAACTATTGGTGGGAGAAGGAGCAGAGAAGAAGAGCATGAAAGCAGATCTGGCAGTGATAATATGGAAGGAGCTTCCGGTGACGATCAAGATGCCGCCGACAACCCACCCAGAAAGAAGCGCTATCACCGACACACACCACAGCAAATACAAGAGCTTGAAGCTCTGTTCAAAGAGTGTCCTCACCCAGATGAGAAGCAAAGATTGGAGCTCAGCAAAAGGCTTTGCTTGGAAACTAGGCAGGTGAAATTCTGGTTCCAGAATCGAAGAACCCAGATGAAGACCCAATTGGAACGCCATGAGAACACGCTGCTAAGGCAAGAGAACGACAAGCTTAGAGCGGAGAACATGTCTATTAGGGATGCCATGAGGAACCCCATTTGCTCAAATTGTGGAGGCCCAGCTATTATTGGTGAAATTTCTCTGGAGGAACAGCATCTTAGGATCGAAAATGCCCGATTGAAGGATGAGCTAGACCGAGTTTGTGCAATCGCTGACAAGTTTTTGGGTCGCCCCATTTCTTCATTGGCCAACTCTATTGCTCCTCCATTGGCAAACTCAAGTTTGGAACTAGGAGTTGGGAACAGTGGTTTTGGTGGTATCAGTATCAGCACTGTGCCTTCAACGTTGCCTTTGGGGCCTGACTTAGGTGTGGGAATTTCTAGCCCTTCAGCCATGGTGACTCCTCCTCCGGCTAGACCAACGGCCCTGGTGACTGGCCTTGGCCATGATAGATCAATAGAGAGGTCTATGTTTCTAGAACTTGCTTTGGCTGCCATGGACGAATTGGCGAAGATGGCTCAGACTGATGAGCCTCTTTGGATCAGGAGTTTAGAAGGTGGAAGAGAAATTTTGAACCGTGATGAGTACATGAGGGCTTTCACCCCTTGCATTGGCTTGAAATCCAATGGCTTTGTCTCCGAGGCCTCTAGGGAGTCTGGGATGGTAATTATAAACAGCTTGGCCCTTGTTGAAACTTTAATGGACTCTAATCGTTGGGCAGAGATGTTTCCTTGTTTGATTGCAAGAACCGCCACCACTGAAGTGATATCCAGTGGAATAAATGGAACCAGAAATGGTGCACTTCAACTAATGCATGCCGAGCTCCAAGTTCTTTCTCCTTTAGTTCCTGTTCGTGAGGTCAATTTCCTCCGCTTCTGCAAGCAGCACGCAGAGGGTGTGTGGGCAGTGGTGGATGTGTCTGTTGATACCATCCGAGAAACTTCTGGCGCACCAGCTTTTGTGAACTGCAGGAGGCTTCCTTCTGGATGTGTGGTACAAGATATGCCTAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATACGAAGAAAGCCAAGTCCACCAGCTTTACAAACCCTTGTTAAGCTCAGGCATGGGTTTTGGTGCCCAACGTTGGGTAGCCACCCTCCAACGCCAGTGCGAGTGTCTCGCTATCTTAATGTCCTCATCAGTTCCCTCTCGGGACCATTCGGCGATAACCCCCGGCGGTCGGCGGAGCATGCTGAAGCTAGCGCAGCGGATGACCAACAACTTTTGCGCTGGAGTCTGCGCTTCGACAGTGCATAAATGGAACAAGCTCAACGCTGGCAACGTCGACGAGGACGTCCGGGTGATGACCCGGAAGAGCGTGGACGATCCCGGCGAGCCACCAGGCATAGTGCTGAGCGCCGCCACCTCGGTATGGCTCCCGGTTTCCCCCCAGAGGCTGTTCGATTTCCTTCGAGACGAACGGCTCCGAAGCGAATGGGACATACTATCAAACGGTGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGACCATGGCAACTGCGTCTCTCTCCTTCGTGCCAGCGCTATGAATGCGAACCAGAGTAGCATGCTAATATTGCAGGAAACTTGCATAGACGCGGCGGGGTCGCTTGTGGTGTACGCACCGGTGGATATTCCGGCCATGCACTTGGTGATGAACGGTGGTGATTCGGCTTATGTTGCTTTACTGCCATCAGGGTTTGCCATTGTGCCAGATGGGCCTGGGTCACGTGGGTCCCAAACCGCCTTGTGCAACGGAGGCGGTAGTGGTAGAGTTAGTGGGTCGCTTCTAACGGTGGCGTTTCAGATACTTGTGAATAGCCTACCTACGGCCAAGCTCACGGTGGAGTCGGTGGAGACGGTGAACAACCTCATCTCGTGCACGGTTCAGAAGATCAAGGCCGCTCTTAACTGCAGCGCGTGTGATAGACGCGGACAAGGGGGTGGGGGTGTTGAGTCAAGAACGAACCGCGCAGGATGTGAGAGAAGTCCCTTGAATAGGGGTGAGGATCCGAGACTGAATCGGATCGTGTAG 2595 0.5152 MSFGGFLDDNSGGGGGARIVADTPYSNGSISINDNNRMPSGAISQPRLVTSTLAKSMFNSPGLSLALQTDIDGQRDVNRIPENYEQTIGGRRSREEEHESRSGSDNMEGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCAIADKFLGRPISSLANSIAPPLANSSLELGVGNSGFGGISISTVPSTLPLGPDLGVGISSPSAMVTPPPARPTALVTGLGHDRSIERSMFLELALAAMDELAKMAQTDEPLWIRSLEGGREILNRDEYMRAFTPCIGLKSNGFVSEASRESGMVIINSLALVETLMDSNRWAEMFPCLIARTATTEVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYKPLLSSGMGFGAQRWVATLQRQCECLAILMSSSVPSRDHSAITPGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHLVMNGGDSAYVALLPSGFAIVPDGPGSRGSQTALCNGGGSGRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALNCSACDRRGQGGGGVESRTNRAGCERSPLNRGEDPRLNRIV 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0919 864 MobiDBLite consensus disorder prediction 850 864 - -
Glsi06g0919 864 MobiDBLite consensus disorder prediction 76 131 - -
Glsi06g0919 864 Pfam START domain 339 563 IPR002913 GO:0008289
Glsi06g0919 864 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 120 824 IPR042160 -
Glsi06g0919 864 Gene3D - 404 560 IPR023393 -
Glsi06g0919 864 SMART HOX_1 122 185 IPR001356 GO:0003677
Glsi06g0919 864 MobiDBLite consensus disorder prediction 832 864 - -
Glsi06g0919 864 ProSitePatterns 'Homeobox' domain signature. 156 179 IPR017970 GO:0000981|GO:0006355
Glsi06g0919 864 CDD homeodomain 123 181 IPR001356 GO:0003677
Glsi06g0919 864 ProSiteProfiles START domain profile. 330 566 IPR002913 GO:0008289
Glsi06g0919 864 FunFam Homeobox-leucine zipper protein HDG1 111 197 - -
Glsi06g0919 864 CDD START_ArGLABRA2_like 334 562 - -
Glsi06g0919 864 Pfam Homeodomain 124 179 IPR001356 GO:0003677
Glsi06g0919 864 Coils Coil 175 207 - -
Glsi06g0919 864 SUPERFAMILY Homeodomain-like 108 181 IPR009057 -
Glsi06g0919 864 Gene3D - 110 197 - -
Glsi06g0919 864 SUPERFAMILY Bet v1-like 582 813 - -
Glsi06g0919 864 MobiDBLite consensus disorder prediction 88 104 - -
Glsi06g0919 864 SMART START_1 339 563 IPR002913 GO:0008289
Glsi06g0919 864 FunFam Homeobox-leucine zipper protein GLABRA 2 339 562 - -
Glsi06g0919 864 ProSiteProfiles 'Homeobox' domain profile. 121 181 IPR001356 GO:0003677
Glsi06g0919 864 SUPERFAMILY Bet v1-like 332 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0919 Glsi-ChrGlsi06 10304852 10309865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0919 1 827 Homeobox Transcription Factor Family AT3G61150 64.405 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Glsi06g0919 START 2e-58 CL0209