Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0901 ATGCCTCGGGGAACCCTTGAAGTTATTTTGATGAGAGCCAATAACCTTGATGACACTTTTTTCGGCGACATAGATCCTTATGTGCACATCAGCTACAGGTCGCAGGAGCACAAAAGTACGGTTAAAGAGGATGCTGGATCTGACCCAGAATGGAATGAGTCCTTTCTTTTCACAATTAGTGGGACAGCCTCTGAGCTAAGGATGAAATTAAAGGACAAAGATACTATCACTTCTGACAGTTTTATTGGCGAGGCAAAAATTGATTTAGAACGAGTTCTTCGTGAGGGTAGCGTCGTAGAATCTTCTTACGAAGTTCTGAAAGATGGAGAGACTTGTGGGGAGATCGTTGTGTCTCTCGTTTTCACTGCAGAGGAGAGAGACGATGGCTGTTGCTCAGATTAA 402 0.4378 MPRGTLEVILMRANNLDDTFFGDIDPYVHISYRSQEHKSTVKEDAGSDPEWNESFLFTISGTASELRMKLKDKDTITSDSFIGEAKIDLERVLREGSVVESSYEVLKDGETCGEIVVSLVFTAEERDDGCCSD 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0901 133 Gene3D C2 domain 2 123 IPR035892 -
Glsi06g0901 133 Pfam C2 domain 4 104 IPR000008 -
Glsi06g0901 133 PANTHER C2 DOMAIN-CONTAINING 1 125 - -
Glsi06g0901 133 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 122 IPR035892 -
Glsi06g0901 133 SMART C2_3c 5 101 IPR000008 -
Glsi06g0901 133 ProSiteProfiles C2 domain profile. 1 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0901 Glsi-ChrGlsi06 9910862 9914958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0901 4 93 C2H2 Transcription Factor Family AT4G21160 27.778 1.74e-09 52.4