Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi06g0883 | ATGAGGGGAGGGAGAAAGCCTGCCAATGGTAGAGAGAAGCCACTGAATCATGTTGAAGCAGAGAGACAGAGACGCGAGAAGCTTAACCAGAGGTTTTACGCCTTAATTGCTATGAAGATCAAAGTGTTGGAAGCTGCAAAGGGTATGATAAACAAGAAGGACAAGCAGTTGCCATTGTCAGATATTGATTTTCATTCTAGACAGGATGACGCGGTTGTGAGGGTGAGCTGCCCATTGGATATCCATCCTGTTTCTGGAGTTGTTAAAACGTCGAGGGAAAGTCAAATTGTAGCACAAGAGTAA | 303 | 0.4455 | MRGGRKPANGREKPLNHVEAERQRREKLNQRFYALIAMKIKVLEAAKGMINKKDKQLPLSDIDFHSRQDDAVVRVSCPLDIHPVSGVVKTSRESQIVAQE | 100 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi06g0883 | 100 | PANTHER | MYC | 3 | 35 | IPR045084 | GO:0003700|GO:0006355 | |
| Glsi06g0883 | 100 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Glsi06g0883 | 100 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 4 | 38 | IPR036638 | GO:0046983 | |
| Glsi06g0883 | 100 | Gene3D | - | 5 | 61 | IPR036638 | GO:0046983 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi06g0883 | Glsi-ChrGlsi06 | 9688977 | 9689358 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi06g0883 | 4 | 97 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT4G16430 | 47.500 | 5.70e-30 | 108 |