Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi06g0876 | ATGGCATTCACAGGAACTCTGGATAAATGCAATGCTTGTGATAAGACTGTTTATGTGGTGGACATGTTGTCCCTTGAAGGGTTACCTTACCATAAATCTTGCTTCAAATGCAGTCACTGCAAGGGCTTCCTTTCGATGAGCAGCTACTCCTCAATGGATGGTGTCCTCTATTGCAAACCACATTTTGAACAGCTTTTCAAGGAATCTGGCAATTTCAGCAAAAACTTTCACACAGCAAAGTCTTCTGAGAGATCACATGAAATGAGCAAGAACTCAAACAGATTCTCTTCCTTGTTCAGTGGAACCCAAGACAAATGTTCAGTTTGCACAAAAACAGTCTATCCACTGGAAAAGCTGACCCTGGAAGGAGAATCCTACCACAAGACTTGCTTTAGGTGTGCTCATGCAGGGTGCCCTCTCACACATTCCTCCTATGCTGCCCTTGATGGTGTCCTCTATTGCAGGCACCATTTTGCTCAACTTTTCATGGAGAAGGGAAACTACAACCATGTTCTTCAGGCTGCTGCTGCTCACAAGAAGATTAGTACTCCTCCTCCAGAGCCAGCAGACGAGTCTGAGTAA | 582 | 0.4467 | MAFTGTLDKCNACDKTVYVVDMLSLEGLPYHKSCFKCSHCKGFLSMSSYSSMDGVLYCKPHFEQLFKESGNFSKNFHTAKSSERSHEMSKNSNRFSSLFSGTQDKCSVCTKTVYPLEKLTLEGESYHKTCFRCAHAGCPLTHSSYAALDGVLYCRHHFAQLFMEKGNYNHVLQAAAAHKKISTPPPEPADESE | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi06g0876 | 193 | ProSiteProfiles | LIM domain profile. | 8 | 68 | IPR001781 | - | |
| Glsi06g0876 | 193 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 132 | 172 | - | - | |
| Glsi06g0876 | 193 | Gene3D | Cysteine Rich Protein | 5 | 72 | - | - | |
| Glsi06g0876 | 193 | ProSiteProfiles | LIM domain profile. | 104 | 164 | IPR001781 | - | |
| Glsi06g0876 | 193 | Gene3D | Cysteine Rich Protein | 100 | 170 | - | - | |
| Glsi06g0876 | 193 | PANTHER | OS06G0237300 PROTEIN | 6 | 88 | - | - | |
| Glsi06g0876 | 193 | FunFam | LIM domain and actin-binding 1 | 4 | 74 | - | - | |
| Glsi06g0876 | 193 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 98 | 131 | - | - | |
| Glsi06g0876 | 193 | ProSitePatterns | LIM zinc-binding domain signature. | 10 | 44 | IPR001781 | - | |
| Glsi06g0876 | 193 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 2 | 35 | - | - | |
| Glsi06g0876 | 193 | SMART | lim_4 | 9 | 61 | IPR001781 | - | |
| Glsi06g0876 | 193 | SMART | lim_4 | 105 | 157 | IPR001781 | - | |
| Glsi06g0876 | 193 | CDD | LIM1_SF3 | 6 | 68 | - | - | |
| Glsi06g0876 | 193 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 36 | 76 | - | - | |
| Glsi06g0876 | 193 | Pfam | LIM domain | 106 | 161 | IPR001781 | - | |
| Glsi06g0876 | 193 | Pfam | LIM domain | 10 | 65 | IPR001781 | - | |
| Glsi06g0876 | 193 | FunFam | LIM domain and actin-binding 1 | 100 | 170 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi06g0876 | Glsi-ChrGlsi06 | 9610442 | 9612913 | Dispersed/Wgd |
Transcription factors information