Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0867 ATGCATAAGGTCAGATGCATAAGGTGTCTCGAGGTGCTAGGCCCTTATAATTGTGGTCTGATGCATAAGGTGTCTCGAGGTGCTAGGCCCCCTAATGGTTATGATGCCAATCTTGTTTTCCCATCACTAGTTGCCTCAGAGATGAGAAGGGATGGACATCTTCGTACATCAACGTTCAACCCGAACAATTTATATGCTGACTGGTTTAATTACATGAATGATGGCTATGTGGAAAGAATTCAAACGGCATGTTTAAGCATTACTGCCAACCTTGATATCAGCGACTTGGATGTTTCTAGATCCATTGGTGATTTATACCTTAAAAAGGCAGAATTTAACAAGGAACCTTTGTATGCTAAGTTTCGTCTCCGTGAACCTTTTAAAAGACCAATTTTGAGCTCTGAGCCATCGATTTCTGTTCATGAACTTCAGCAGCAAGATCAATTTCTCATATTTGCTTCTGATGGCCTGTGGGAGCACCTTAGCAATCAGGATGCAGTTGATATAGTTCAAAATCACCCACGCAGTCTTGTCTATGGACTTTTGCTTGTTGATGTGCTCATACATTTAGGTGTTTTGCTCATACATTTTGTGGGTGGTATTCAATGTGCATTCAGATTGGGAAATGAATGA 633 0.4092 MHKVRCIRCLEVLGPYNCGLMHKVSRGARPPNGYDANLVFPSLVASEMRRDGHLRTSTFNPNNLYADWFNYMNDGYVERIQTACLSITANLDISDLDVSRSIGDLYLKKAEFNKEPLYAKFRLREPFKRPILSSEPSISVHELQQQDQFLIFASDGLWEHLSNQDAVDIVQNHPRSLVYGLLLVDVLIHLGVLLIHFVGGIQCAFRLGNE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0867 210 SMART PP2C_4 11 187 IPR001932 -
Glsi06g0867 210 CDD PP2Cc 70 176 IPR001932 -
Glsi06g0867 210 ProSiteProfiles PPM-type phosphatase domain profile. 1 210 IPR001932 -
Glsi06g0867 210 Pfam Protein phosphatase 2C 78 173 IPR001932 -
Glsi06g0867 210 SUPERFAMILY PP2C-like 70 174 IPR036457 -
Glsi06g0867 210 Gene3D - 70 182 IPR036457 -
Glsi06g0867 210 PANTHER PROTEIN PHOSPHATASE 79 175 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0867 Glsi-ChrGlsi06 9308849 9312711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0867 96 176 PP2C-type Phosphatase Gene Family AT5G66080 80.247 1.76e-42 142