Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0865 ATGGGATTAGTTTTGTGTTGGTTAAACGCTGCTCTAGTTGGACTGGTTTCTCTAGTCATTCTTTCTTTCTCTGTCTTACGGAGGTCCAGAATTGGTCAGAGCAGAGAGGCGCCTTTAGCTGCAGGTGCATGGCCCATAATTGGTCACCTCCCGCTTTTGAGCGGCAGCGGTTCCCAAGTACCCCATTTCACTTTGAGTGCTATGGCAGACAAGTATGGACCCCTTTTCACCATTAGGCTTGGGGCGAAACGTGCTTTGGTGGTGAGCAACTGGAAAATCGCTAAGGAGTGCTTCACCGCCAACGACATAGCCGTGTCCGGGCGTCCTAGTCTTGTGGCTGTTCAACAACTGAGCTACAACCAAGCCATGTTCTCTTTCTCACCTCATGGTCCTTATTGGCGTGAAATGCGTAAGATTTCTATGTCAGAGTTGCTCTCTAATCGCCGAGTCGAGCTATTGAGCCCTATTCGTGTCTCCGAGGTTGCAACTTCAATTAAAGGGCTTTCCAAACTCTGGACTGAAAAAAAGGAAGAGTCAGATCAAGTACTACTGGAGCTCAGGCAGTGGTTTGGCGAGTTGATCCTCAACGTTGTTATTAGAATGATTGCTGGGAAGCGATATTTTGGTGTGAAAGCTGAGGCTAACGAGGAGGAGGCACGACGGTGTCTGAAAGCCTTGAGGGAATTTGTTCGTTTGTTGGGGTTATCTGTGGCAGGGGATGCTTTTCCCTGTCTTCGATGGCTGGATTTGGGTGGACATGAGAAGGCTATGAAGAAAACTGCAAGGGAACTGGACATAATATTAAGTGAGTGGTTAGAGGAGCACCGGCTAAAGAGAGCTTCGGAGGTCACAGCGGCCCAAGACTTCATCGACGCCATGCTTTCGGTTTTGGATGGCTCAAAGCTCGGAGGGTATGATGCGGATACCATCATCAAAGCCACAACATTGAATTTATTATCAGCAGCGGTTGACGCAAGCACAGCAACCCTTATATGGGCCATGTGTCATTTGCTAAGAAACCCCCACGTATTGAATGAAGCACAAAAAGAATTGGACATCCAAGTTGGAAAAGAAAGAACAGTGAGTGAATCAGATATAAGTAAGCTGGTATTCATGCAAGCCATAGTTAAGGAGACACTAAGGCTAACTCCACCAGTGCCACTTTCAGGAACTCGCGAGTTCACTCAAGATTGCACCATAGGTGGCTACCACGTTAGGAAGGGAACAAGACTAATGACAAACTCGTGGAAGATTCAAACAGACCCCAGCATTTGGTCTGACCCTTTGGAGTTTAAACCAGAGAGATTCCTTACTACCCACAAAGATGTTGATGTTAGAGGTCATGATTTTGAGTTAATACCATTTGGAAGTGGTAGAAGAATATGCCCAGGAATATCATTTGGCCTTCAAACTATTCATCTCACTTTGGCTACTTTCCTACACTCCTTTGAAATTTCAAAGGCATCCCAGGAACCCATTGATATGAGTCAAATTTTTGGACTAACTAACATGAAAGCGACGCCGCTTCTTGTTCTCATCAAACCCCGACTTTCTTCCAATCTCTATGATGCACTGTGA 1578 0.4613 MGLVLCWLNAALVGLVSLVILSFSVLRRSRIGQSREAPLAAGAWPIIGHLPLLSGSGSQVPHFTLSAMADKYGPLFTIRLGAKRALVVSNWKIAKECFTANDIAVSGRPSLVAVQQLSYNQAMFSFSPHGPYWREMRKISMSELLSNRRVELLSPIRVSEVATSIKGLSKLWTEKKEESDQVLLELRQWFGELILNVVIRMIAGKRYFGVKAEANEEEARRCLKALREFVRLLGLSVAGDAFPCLRWLDLGGHEKAMKKTARELDIILSEWLEEHRLKRASEVTAAQDFIDAMLSVLDGSKLGGYDADTIIKATTLNLLSAAVDASTATLIWAMCHLLRNPHVLNEAQKELDIQVGKERTVSESDISKLVFMQAIVKETLRLTPPVPLSGTREFTQDCTIGGYHVRKGTRLMTNSWKIQTDPSIWSDPLEFKPERFLTTHKDVDVRGHDFELIPFGSGRRICPGISFGLQTIHLTLATFLHSFEISKASQEPIDMSQIFGLTNMKATPLLVLIKPRLSSNLYDAL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0865 525 CDD CYP82 73 516 - -
Glsi06g0865 525 Gene3D Cytochrome P450 24 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 PANTHER CYTOCHROME P450 82C3-RELATED 18 522 - -
Glsi06g0865 525 FunFam Cytochrome P450 82C4 27 514 - -
Glsi06g0865 525 Pfam Cytochrome P450 43 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0865 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Glsi06g0865 525 SUPERFAMILY Cytochrome P450 43 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0865 Glsi-ChrGlsi06 9064348 9066963 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0865 37 522 Cytochrome P450 AT4G31940 50.101 7.37e-175 501