Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0822 ATGGCTTCTCGGAGTCACAATCGTGAGAAAATGGCGAAGAATCTAAGAACACAGCTAGCGGTTGCAGTGAGGAGCATTCAGTGGAGCTACGGGATTTTCTGGGCAACTTCAACCAGCAAACAAGGAGAACTAGAATGGAATGAAGGCTACTACAATGGTGAAATTAAGACAAGGAAGACAGTCCAAGCCATGGAAATAAAGGCTGATAAAATAGGCTTACAGAGAAGTGAGCAACTGAGAGAACTCTACAAGTTTCTTCTTGTGGGCGAAGCCGATCCACAGGCTAAAAGACCTTCTGCTGCATTATCTCCAGAGGATCTCACAGACTTAGAGTGTTTGCCCGGAAGAGCATTAGAAAGTGGCAAAACCATCTGGTTATGCAATGCTCAATATGAAGATAGCAAAGTTTTCTCACGGTCTTTGCTTGCAAAGACTGTGGTGTGTTTTCCCTACCTCGGAGGTGTCATTGAGATCGGCACAACTGAGCTGGTCTCGGAAGACCCTAATCTCATTCAACATGTCAAAACTTGCTTCTTAGAATTCTCAAAGCCTATCTGCTATGATAAATCTTCCTCTGCCCTCAATGAAGCAGATGATGATAAGGATCCAACATGCACCAAGGTTGATGGTTGGATAGAAACAATGACTTTGGAAAGCTTATGTTTCCCTACTGAAAAAATAAAATTCGATCAAGATCCAGTCAAGGGATTACAAGAAGATAACGATGAAGAGTTTAACATGGATTCTTCTGATGAATGTTCCAGAGGTTGTGAGCACCACTGCCAAATGGAAGACTCCATGATTGAGGGCATTAGTGGTGGGCCTCCTCAAGTTCACTGCTGGCATATGGTGGATGATGCCTTAAGCAATGGTGCTTGGGATTCCTGGAGTTCTGGTGGTCATATGTCTGAAGCTTTGGAGAACCGAGGCAAGGCATTGAAAAATGTAGATCAAATTCAGTTAAGGAAACTTCAAGACTGCAATCACTCAAGGCTAAGCTCCTTGGATATTGAAGCTGATGAAGACATGTACTACAAAAGAACTCTCCAAGCTCTTTTAGGAGATTCATCTACATTTAAAGGAATTCCATACACTAGCAACTCAAATTGCAAATCAAATTTTGTAAAATGGAAGAAAGGAGGAATTCCTGAAAGGGCTAGGCAACGTTTAGACCAAAGCATGTTAAAGAAGATTTTATTCACTGTTCCTCTTATGCATAGCAATTGCATCTCTCTCAAGTCACAAAAGCAACATGAAAAAATAGAATTTCCTGGAAAATTGGACAATGATGATAATTGCGCTGGAAATGTTTTATCTGATAAAAGAAGAGAAACTGAAAACTTGCAGGTTCTCAAGTCCATGGTTCCTTCTATAAATGAGGTGGACAAGATTTCAATCCTCAGCGACACAATTGAATACTTGAAAGAGCTTGAGGCAAGAGTGGAAGAACTAGAATCTTGCATGGACATTGCAGATTCTGAAGCAAGAACTAGAAGAAAATACCTAGAAGCGCTAGAGCAGACATCAGATAACTATGACACAAGAAAGATTTACAAGGGAATGAAACCTTGTATAAACAAGAGGAAGGCTTGTGATATTGATGAGTCAGACACAGAGCTAAATAGAGTGGTTATTAAAGAGGGAAAGCCATTGGATGTAAAAGTCAACATGGAGCAGCAGGAGGTTATGATTGAGATGAAATGTCCTTATAGGGAATACATATTGCCTGATATAATGGATGCCATAAACAATATGCATTTGGATGCCCACACAGTTCAATCATCAACAGTTGATGGAGTTTTCATATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACTGCACCGATGAGGATGATCTACGAAGCACTCTCGAAAGTTTCTGTCAAGATTTGA 1896 0.4061 MASRSHNREKMAKNLRTQLAVAVRSIQWSYGIFWATSTSKQGELEWNEGYYNGEIKTRKTVQAMEIKADKIGLQRSEQLRELYKFLLVGEADPQAKRPSAALSPEDLTDLECLPGRALESGKTIWLCNAQYEDSKVFSRSLLAKTVVCFPYLGGVIEIGTTELVSEDPNLIQHVKTCFLEFSKPICYDKSSSALNEADDDKDPTCTKVDGWIETMTLESLCFPTEKIKFDQDPVKGLQEDNDEEFNMDSSDECSRGCEHHCQMEDSMIEGISGGPPQVHCWHMVDDALSNGAWDSWSSGGHMSEALENRGKALKNVDQIQLRKLQDCNHSRLSSLDIEADEDMYYKRTLQALLGDSSTFKGIPYTSNSNCKSNFVKWKKGGIPERARQRLDQSMLKKILFTVPLMHSNCISLKSQKQHEKIEFPGKLDNDDNCAGNVLSDKRRETENLQVLKSMVPSINEVDKISILSDTIEYLKELEARVEELESCMDIADSEARTRRKYLEALEQTSDNYDTRKIYKGMKPCINKRKACDIDESDTELNRVVIKEGKPLDVKVNMEQQEVMIEMKCPYREYILPDIMDAINNMHLDAHTVQSSTVDGVFILTLKSKFRGAATAPMRMIYEALSKVSVKI 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0822 631 Gene3D - 441 522 IPR036638 GO:0046983
Glsi06g0822 631 Coils Coil 467 494 - -
Glsi06g0822 631 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 15 178 IPR025610 -
Glsi06g0822 631 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 444 490 IPR036638 GO:0046983
Glsi06g0822 631 SMART finulus 437 483 IPR011598 GO:0046983
Glsi06g0822 631 PANTHER TRANSCRIPTION FACTOR TT8 7 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0822 Glsi-ChrGlsi06 8469891 8474888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0822 6 628 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 38.552 2.79e-125 382