Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0797 ATGCTTGGTAATGGGCAGCCTGTGGATTTGTATAAGCTCTTCATGGTTGTTAAGGAGAAAGGTGGGTATGACGCAGTCTCTAAAAACCATCTGTGGGATCTGGTGGGTGAACAATCTGGGTTGGGTATGAGTATTGGTTCTTCGGTGAAACTGATTTACAGTAAGTACTTGAGTACCTTAGAGATATGGCTAAAAACAGTTGCTGACAGTAAGGTCTCTGACTGCAGTTTGGAGTTTAATCGAGTTGATTTTGGTAGGCATTTGATGGAATTGCACGCTGAAGTTGAAGGGCTCTTGTCCGATTGTACTGATGATGAAGTGGGAGACGAGATGTGTCAACGTTGTGACTTTAACACTGAATATAAAGAACCAGATGGTCAGGAATTATGTGGTGCTAATGGAGTAAAGAGCATGACTGCAGAGTCTGGAGGTACCAAAAAAGTTCAGAATGGAGGATTTATTGATTTGAATATGCCAAACCCTGAGATGAATGAACCTAGTCCAGGAAATTTGTGCACTAAGGATGAGGTAAACAGAATGCCAGGATTGTCAGATGGAGGCAAGAGAAATGACAATGATGATGATGTGTTGGTATTGGATCCATCCAGTGTTAATAGAGAGAGTTCTGATCGTAAGAGGAAGAGAGAGTCTGGGTGGGAGATCCTAAGCTGGGTTACTGGCATTGCAAAGAATCCTTGTGATCCTGTTGTTGGTTCAATACCTGAAAAATCAAAGTGGAGATCTCACAGTAATGAGGAAAACTGGAAGCAGGTTTTGTTGTTTCGAGAGGCTGTTTTTCTGAAAAGACATGCTGAGTCAAGCAGTGAACAATTGAATTGGCAGAATCAGAAGATGCATCCATGCATGTATGATGATCACCTTGGGGCAACTTACAATCTTAGAGAGAGATTGAAGTGTGACAAGAGGCTTTTATTGGGAAATTCTGCATCTGTTGTACAAGTCTCTTCAGATGCGTCCTCTGAAACCCAGGGTGATTTGGACAGATCTCCAACTCCTCGTACTGAAGATTGTGCTGAGAAACAGTTGCTTGATTCCTCTACTGCACTGTCAGGTCTTGATAAATGTGCCACAATGCATATCCCTCTGGGGCCAAATCATCAAGCTGAAGTACCAGATTGGACGGGCATGACTTCTGAAAGTGATTCTAAATGGTTGGGAACCCAAATATGGCCATCAGATAAAGTAAATAACAGACTTCTCATTGAGAGGGATCCCATCGGAAAGGGAAGACAAGATTCTTGTGGCTGTCAAGTACCAGGTTCTGTTGAGTGTGTCAGATTTCACATAACTGAGAAAAGGGGTAAAGTTAAGCTGGAATTGGGTGTGGCTTTTTACCAGTGGAAGTTAGATAAGGTAGGTGAAGAAGTAAGGCGTTTGTGGACAGTGGAAGAAGAGAAGAAGTTTAAGGATGTGGTGCGATCAAACCCTCCATCACTTGAGAGTTATTATTGGGATCATATTTTTAGATCATTTCCTAAGAAGACCAGGGAAGATTTAGTTAGCTACTATTTCAATGTATTTCTTTTGCAGCGCAGAGGATATCAGAATAGGCATACTCCAAATGACATTGACAGTGATGATGATGAATCAGAATCTGGACCATTGAGGAATGTTTTTGGACAGCAAACACAGAAGTGTACCAGCTCCATCTTATTAACCCCTAAAAAGCCAAAGACAAAGAATGGATAG 1710 0.4181 MLGNGQPVDLYKLFMVVKEKGGYDAVSKNHLWDLVGEQSGLGMSIGSSVKLIYSKYLSTLEIWLKTVADSKVSDCSLEFNRVDFGRHLMELHAEVEGLLSDCTDDEVGDEMCQRCDFNTEYKEPDGQELCGANGVKSMTAESGGTKKVQNGGFIDLNMPNPEMNEPSPGNLCTKDEVNRMPGLSDGGKRNDNDDDVLVLDPSSVNRESSDRKRKRESGWEILSWVTGIAKNPCDPVVGSIPEKSKWRSHSNEENWKQVLLFREAVFLKRHAESSSEQLNWQNQKMHPCMYDDHLGATYNLRERLKCDKRLLLGNSASVVQVSSDASSETQGDLDRSPTPRTEDCAEKQLLDSSTALSGLDKCATMHIPLGPNHQAEVPDWTGMTSESDSKWLGTQIWPSDKVNNRLLIERDPIGKGRQDSCGCQVPGSVECVRFHITEKRGKVKLELGVAFYQWKLDKVGEEVRRLWTVEEEKKFKDVVRSNPPSLESYYWDHIFRSFPKKTREDLVSYYFNVFLLQRRGYQNRHTPNDIDSDDDESESGPLRNVFGQQTQKCTSSILLTPKKPKTKNG 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0797 569 MobiDBLite consensus disorder prediction 525 569 - -
Glsi06g0797 569 CDD ARID 4 61 - -
Glsi06g0797 569 Gene3D - 1 74 IPR036431 GO:0003677
Glsi06g0797 569 MobiDBLite consensus disorder prediction 321 343 - -
Glsi06g0797 569 CDD SANT 467 514 IPR001005 -
Glsi06g0797 569 Pfam Myb-like DNA-binding domain 466 513 IPR001005 -
Glsi06g0797 569 SMART ELM2_2 367 418 IPR000949 -
Glsi06g0797 569 SMART sant 463 516 IPR001005 -
Glsi06g0797 569 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 565 - -
Glsi06g0797 569 Pfam ARID/BRIGHT DNA binding domain 4 61 IPR001606 GO:0003677
Glsi06g0797 569 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Glsi06g0797 569 SMART bright_3 2 66 IPR001606 GO:0003677
Glsi06g0797 569 MobiDBLite consensus disorder prediction 542 569 - -
Glsi06g0797 569 SUPERFAMILY ARID-like 4 75 IPR036431 GO:0003677
Glsi06g0797 569 MobiDBLite consensus disorder prediction 159 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0797 Glsi-ChrGlsi06 8128180 8132279 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Glsi06g0797 ARID 2.8e-09 CL0123