Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0796 ATGCCTTCTGAGAACCTCCTTACAGTGTTGAAGAACCCAGCAAAAATGTCACTTCTTACAACTCCCTATTCCTTCATCCCCATCGCTTTCTTTCTTTTAACGACAACCTCTTTTGCCCTTTCTGTTTCTGAATTTGAAGCAAACGAAGCCAATTTTCAATGGCCCATTTCCTCAACTTTCACTACCATTACTGGAAAAACACTCCCAGTTAAGCAGAACCTAGAGTTCTCGAGCTCTGCGGTCGCTGAAACTGAAGGAGTCGCTTCGAGCAGAGGCAGGAAGCTGGAAACGAACCGTGTTATAATAAGAGGAAACAGAACTATTCCGAGCGAGAATCAAACATTTGAGCTTGGGTTTTTCAACGTCAATGGCGAAGAACCCAAATGGTACTTGGGAATTCGGTATGCATCGGTGTCAACCCCAACTTACGTCTGGGTCGCCAATCGGGAAAAACCAAGTAAAAATCTCTCTGAATCGACGCTGGAGATCACAGAAGATGGTCGACTAGCAGTGAAAGATTCGTCAAGTTCAATTCTCTGGCAGAGTACGAACACGGAGTCTTCAACAGAAGAGGTGAAGCTTTTAGAAAATGGGAATTTGGTTTTGCTTACCCATGAAGGCTCCATTTCATGGCAGAGCTTCGATTATCCTACAGATATATGGTTACCGGGTATGAATCTGACTCGGGACCGATCCTTGGTCTCGTGGCGGGGCCCAACGGACCCGTCTCCGGGTTTGTATTCTCTCCGGCTGAGACCACCGGATTACGGTGAGTTCGAGCTCGTCTTCAACAAAAGCATATCTTATTGGACCACCGGAAATTGGACCGGCAAAGCCTTCCTCAACGTGCCGGAGATGACGATTCCGTACATTTATGGCTTCCATTTCATCCACCCATTCACGCCGACGGCATCGTTTGGGTTCTCGGAGAAGTCTCTGGATGGCGGGTTGAAACCACCCACGTATTTTCAGGTGCATTCTCACGGGCAGGTCCGACAATATACATGGTCTCACCAGCAAGGGAGCTGGAACATGTTCTGGTCGGAACCCGACAACGTTTGTGAGGTTCATGGACTATGTGGGAACTTCGGAGTCTGCAATGGTGACCCAACGAAGCCATGTGACTGTCTCTCTGGTTTCAAACCAGCCGATGAAGGTCAATGGGCTTCCCGCTGCTTTTCCGGCGGCTGTCGTCGTGAAAGTGATAAACTCTGCGATAAAAGTGATGGATTTGAAGATCTGGGCATCATGAGATTCGAAGGAGCAAATGCCCAATCATTTCAAAGTAAGTCTCGAAGCATTTGTGAGACTAATTGTTTGGATTCTTGCAATTGTATTGGCTTATCTTTCAATGAAAGGACCAGTTTGTGCAAGAACTTTTATGGGTCTATTTTGAATCTTCAAAATTCATCTTCTCAGAGCTCTTCTGAGGATCAATTTTATGTTAGGGTACAAAGAGTAGGCTCTGTGAAGAAACTGAAATTGGATTATGCAGTTTTGATTGGTACCATTATTGGGTCAATTGTAGTTTTGGGAGTAACGGTAGGGACATTGTTGATTTTGATCAAGAGAAGGCAGAAGAAGAAATTGGAGGAAGATGAATTGATTCCTGTATTGAATTTGCAGCTATTTTCTCACAAAGAGCTTCAAATGGTGACTCGTGGCTTTTCGGAGAAGTTGGGGCATGGTGGGTTTGGTACTGTGTTTCAAGGAGAGTTACCAGACTCTTCTCTTGTTGCTGTGAAACGTTTGGAGAGGCCAGGCGGTGGAGAGAAAGAGTTCAGGGCAGAGGTGAGCACAATTGGGAATATACAGCATGTTAATCTTGTGAGATTGAGAGGATTTTGCTCAGAAAATTCTCATAGACTGTTGGTTTATGAGTTCATGCCAAATGGTGCTCTGAGTGCTTACTTGCACAAAGAGGGGCCTAGTTTGGGCTGGGATGATCGGTTCCGAGTAGCAATTGGAACAGCTAAGGGCATAGCATATTTACATGAGGAATGCAGAGATTGCATCATTCACTGCGATATCAAACCCGAAAACATCCTCTTGGACAGTAATTTCACCGCAAAGGTTTCAGATTTCGGATTAGCAAAGCTCATTGGCAGGGACTTCAGCAGGGTGTTGGCAACCATGAGAGGCACTCGGGGGTATGTAGCACCAGAGTGGATTTCTGGTGTGGCAATTACAACCAAAGCTGATGTTTACAGCTATGGAATGACATTGCTAGAACTAATTGGCGGTCGTCGTAATGTGGAGGCCCCTCCATCTGCCGGTGGTGGCAGAGAGAGTGGTTGTTGTGAGGGTGGGGAGAAATGGTTCTTTCCTCCATGGGCCGCGCAGCAGATAATTGAAGGAAACATGGCTGCTGTGGTTGATAAGAGGCTTGCAGATGCATATAACATGGAGGAGGCTAGGAGGATTGCTATGGTGGCAGTGTGGTGCATTCAGGATGATGAGGAAACTAGACCTACAATGGGGATGGTGGTGAAAATGTTGGAAGGGTTGGTGGAAGTAAGTGTTCCTCCAATGCCTAAATTGCTACTAGCATTGGTTACCGAGGAGTCCTTTCACGGGGTCAAGCCAGATTTCAGCACCGGTGAAAGCTTCTCTGGTGTTGGCAATGTGGAAGTGTCAACTGCTGGTTCAGAATCATTTACAGGGGGCGTTTCTTCCCCAGCAAATGTCAATGTTAAAGTTATTGGTTCATATCAATCAGCAAAAATAGGGAGCCATACAGAAAATGAGGTTCCATCCTCAGGTTCATGGTCACCTGGGCAAGCCACAGACGATGGTAGCTCGAAGGGCGAGACGCCGTTCGTGCATGGATCCACATTGTTTGAGCAAGAGGAGCTGCACCATGCACCAGCAGGTCCAATAGAGACCTATGCAGGAGACTACCCTCCAATAAAGAGCTTCGCAGACATAAAAAATGTGTGTTCTGTTGAGACCTCAAAGCTTTGGTCTATTGCTGGCCCTATTGCCTTCAATATTCTCTGCAACTATGGCGTCAACTCCTTCACCAGTATCTTTGTTGGCCACCTTGGAAATGTGGAGCTCTCTGCTGTTTCCATCTCTCTCTCTGTCGTCTCCAATTTCTCTTTTGGCTTCTTGCTTGGTATGGGAAGTGCACTAGAGACTTTATGTGGGCAAGCATTTGGAGCTGGACAAGTAGAAATGCTTGGAATCTACATGCAACGTTCATGGATAATTCTAGTAGCAGCATGCTTCTGCCTCTTGCCACTCTACATTTATGCAAAGCCAATTCTATTACTTCTCGGGCAAGAACATGAAATTGCAGCCCTAGCTGGGACATTCACAATCCAAACTATCCCTCAAATGTTCTCTTTAGCCATAAACTTCCCGACCCAGAAGTTCTTGCAGGCACAAAGTAGAGTAGGGGTTCTGGCTTGGATTGGCTTTGGGGCCTTATTGGTGCACATTGGGGTGCTTTATTTGTTCATTAAGGTCCTTGGTTGGGGCACAGCAGGTGCTGCTGCTGCCTATGATTTCTCAGCTTGGCTAATTGCTTTAGCTCAAGTGGTTTATGTGGTTGGTTGGTGCAAGGAAGGTTGGAGAGGCTTGTCATGGCTAGCTTTTAAGGATCTTTGGGCCTTTGTGAAACTCTCAGTTGCTTCAGCAGTCATGCTTTGTCTTGAGATTTGGTATTTCATGACCATCATTGTTCTCACCGGACACCTTGCAAACCCAGTTATTGCTGTTGGTTCTCTTTCCATATGCATGAATTTGAATGGCTGGGAAGGCATGTTGTTTATAGGGATCAATGCAGCTATAAGTGTTAGGGTTTCCAATGAGCTTGGTTCAGGGCATCCCAGAGCTGCAAAGTTTTCTGTTATAGTCACAATCATTGAGTCCCTTGTCATTGGGATCTTCTGTGCAGCCATAATCTTGATCACAAAAGACCATTTTGCTGTCATTTTCACTAGCAGTGTAGAGATGCAAGAGGCAGTTTCTAAATTAGCATCCCTTCTTGGTGCAACCATGATTCTAAATAGTGTTCAGCCTGTTATATCAGGTGTCGCTGTAGGAGGAGGTTGGCAAGCTTTGGTGGCTTATATTAACCTATTTTGTTATTATATCATTGGGCTCCCTCTTGGCTTTGTTCTTGGTTACAAAGGGGGTTTACGGGTAGAGGGTATTTGGTTGGGCATGATCTGTGGGACACTGTTGCAAACAATGATCTTGTTGTATATTATCTACAAAACCAATTGGAACAAGGAGGTTGATCAAGCAACAGAAAGAATGCGAAAATGGACTGGACAAGAATTTGAACTTGGTGCCTCGTAG 4308 0.4564 MPSENLLTVLKNPAKMSLLTTPYSFIPIAFFLLTTTSFALSVSEFEANEANFQWPISSTFTTITGKTLPVKQNLEFSSSAVAETEGVASSRGRKLETNRVIIRGNRTIPSENQTFELGFFNVNGEEPKWYLGIRYASVSTPTYVWVANREKPSKNLSESTLEITEDGRLAVKDSSSSILWQSTNTESSTEEVKLLENGNLVLLTHEGSISWQSFDYPTDIWLPGMNLTRDRSLVSWRGPTDPSPGLYSLRLRPPDYGEFELVFNKSISYWTTGNWTGKAFLNVPEMTIPYIYGFHFIHPFTPTASFGFSEKSLDGGLKPPTYFQVHSHGQVRQYTWSHQQGSWNMFWSEPDNVCEVHGLCGNFGVCNGDPTKPCDCLSGFKPADEGQWASRCFSGGCRRESDKLCDKSDGFEDLGIMRFEGANAQSFQSKSRSICETNCLDSCNCIGLSFNERTSLCKNFYGSILNLQNSSSQSSSEDQFYVRVQRVGSVKKLKLDYAVLIGTIIGSIVVLGVTVGTLLILIKRRQKKKLEEDELIPVLNLQLFSHKELQMVTRGFSEKLGHGGFGTVFQGELPDSSLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEFMPNGALSAYLHKEGPSLGWDDRFRVAIGTAKGIAYLHEECRDCIIHCDIKPENILLDSNFTAKVSDFGLAKLIGRDFSRVLATMRGTRGYVAPEWISGVAITTKADVYSYGMTLLELIGGRRNVEAPPSAGGGRESGCCEGGEKWFFPPWAAQQIIEGNMAAVVDKRLADAYNMEEARRIAMVAVWCIQDDEETRPTMGMVVKMLEGLVEVSVPPMPKLLLALVTEESFHGVKPDFSTGESFSGVGNVEVSTAGSESFTGGVSSPANVNVKVIGSYQSAKIGSHTENEVPSSGSWSPGQATDDGSSKGETPFVHGSTLFEQEELHHAPAGPIETYAGDYPPIKSFADIKNVCSVETSKLWSIAGPIAFNILCNYGVNSFTSIFVGHLGNVELSAVSISLSVVSNFSFGFLLGMGSALETLCGQAFGAGQVEMLGIYMQRSWIILVAACFCLLPLYIYAKPILLLLGQEHEIAALAGTFTIQTIPQMFSLAINFPTQKFLQAQSRVGVLAWIGFGALLVHIGVLYLFIKVLGWGTAGAAAAYDFSAWLIALAQVVYVVGWCKEGWRGLSWLAFKDLWAFVKLSVASAVMLCLEIWYFMTIIVLTGHLANPVIAVGSLSICMNLNGWEGMLFIGINAAISVRVSNELGSGHPRAAKFSVIVTIIESLVIGIFCAAIILITKDHFAVIFTSSVEMQEAVSKLASLLGATMILNSVQPVISGVAVGGGWQALVAYINLFCYYIIGLPLGFVLGYKGGLRVEGIWLGMICGTLLQTMILLYIIYKTNWNKEVDQATERMRKWTGQEFELGAS 1435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0796 1435 MobiDBLite consensus disorder prediction 911 940 - -
Glsi06g0796 1435 Gene3D Transferase(Phosphotransferase) domain 1 629 841 - -
Glsi06g0796 1435 FunFam serine/threonine-protein kinase PBS1-like 522 628 - -
Glsi06g0796 1435 NCBIfam MATE family efflux transporter 993 1388 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Glsi06g0796 1435 Pfam S-locus glycoprotein domain 270 383 IPR000858 GO:0048544
Glsi06g0796 1435 ProSitePatterns Protein kinases ATP-binding region signature. 560 582 IPR017441 GO:0005524
Glsi06g0796 1435 Gene3D Phosphorylase Kinase; domain 1 519 628 - -
Glsi06g0796 1435 Pfam D-mannose binding lectin 142 231 IPR001480 -
Glsi06g0796 1435 FunFam Receptor-like serine/threonine-protein kinase SD1-8 89 214 - -
Glsi06g0796 1435 SUPERFAMILY alpha-D-mannose-specific plant lectins 129 275 IPR036426 -
Glsi06g0796 1435 CDD B_lectin 99 217 IPR001480 -
Glsi06g0796 1435 Coils Coil 1408 1428 - -
Glsi06g0796 1435 SMART blect_4 99 217 IPR001480 -
Glsi06g0796 1435 SMART serkin_6 554 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0796 1435 PANTHER OS07G0415500 PROTEIN 74 845 - -
Glsi06g0796 1435 Pfam Protein kinase domain 557 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0796 1435 CDD MATE_eukaryotic 983 1415 IPR045069 GO:0042910|GO:1990961
Glsi06g0796 1435 Gene3D - 88 214 IPR036426 -
Glsi06g0796 1435 ProSiteProfiles PAN/Apple domain profile. 405 485 IPR003609 -
Glsi06g0796 1435 ProSiteProfiles Protein kinase domain profile. 554 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0796 1435 SUPERFAMILY Protein kinase-like (PK-like) 537 834 IPR011009 -
Glsi06g0796 1435 Pfam MatE 1213 1375 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Glsi06g0796 1435 Pfam MatE 993 1153 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Glsi06g0796 1435 CDD STKc_IRAK 560 836 - -
Glsi06g0796 1435 FunFam S-receptor-like kinase 5 629 842 - -
Glsi06g0796 1435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
Glsi06g0796 1435 ProSiteProfiles Bulb-type lectin domain profile. 93 215 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0796 Glsi-ChrGlsi06 8090944 8103352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0796 544 843 Receptor kinase-like Gene Family AT5G20050 45.367 3.80e-79 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi06g0796 Pkinase 3.3e-45 CL0016