Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0785 ATGGGCTTCCCAGTTGGATACACGGAGGTCGTCTTTCCCAAACTCTTCCTCCACACGCTTTCCCTCCTGGGTTTCATCCGAAACCTCATTTTCTTGCTCTTCCACTTTCTGGGTCTCTCCGATTTCCTCGAAACCGAAGTGGTTTGGTCTGAATCTCACGCCCGGATACCCGAGAACCCACCGGTGTCGGCGCTCCTGATCCGGGAATTCCTCCCGGTCATCAAATTCGGCGAGCTTCTCGCAAACGCAACCGTGGCCGGAGGTGGAGAAACGCCGGAGAGTTGCGCCGTTTGCCTGTACGAGTTCCAAGGGGAGGAAGAAATCAGATGCCTGACGAACTGCAAGCACATTTTCCACCGGGCTTGTCTGGACCGTTGGATGGATCACGATCAGAAAACTTGCCCACTGTGTAGGACCCCCTTTGTGCCCGATGACATGATGGATGATTTTAATCAACGGCTATGGGCTGCTTCTGGAGTTTCTGAATTTTACTGCGACTACACTTCGGTCTAA 513 0.5322 MGFPVGYTEVVFPKLFLHTLSLLGFIRNLIFLLFHFLGLSDFLETEVVWSESHARIPENPPVSALLIREFLPVIKFGELLANATVAGGGETPESCAVCLYEFQGEEEIRCLTNCKHIFHRACLDRWMDHDQKTCPLCRTPFVPDDMMDDFNQRLWAASGVSEFYCDYTSV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0785 170 PANTHER RING ZINC FINGER PROTEIN-RELATED 21 158 - -
Glsi06g0785 170 SUPERFAMILY RING/U-box 94 144 - -
Glsi06g0785 170 FunFam RING-H2 finger protein ATL73 67 145 - -
Glsi06g0785 170 Pfam Ring finger domain 94 138 IPR001841 -
Glsi06g0785 170 ProSiteProfiles Zinc finger RING-type profile. 95 138 IPR001841 -
Glsi06g0785 170 SMART ring_2 95 137 IPR001841 -
Glsi06g0785 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 145 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0785 Glsi-ChrGlsi06 7953709 7954221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0785 1 169 C3H Transcription Factor Family AT1G63840 49.432 4.46e-52 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0785 06 7953709 7954221 Glsi06g0785 06 7953709 7954221 ECH