Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0772 ATGTCTGCTGAGTCAGTCTTTTCTTCAGCTGATCATAACATCAAGGGCCTGCCCACTCACGGTGGACGCTACGTTCAGTACAATGTCTACGGAAATCTGTTCGAGGTTTCAAGGAAGTACGTCCCTCCTATTCGGCCTGTGGGCAGAGGCGCTAGCGGTATTGTTTGTGCTGCTGTAAATGCCGAGACACGAGAGGAAGTTGCTATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCTAAAAGGACCTTACGTGAAATTAAACTGCTTCGGCACATGGATCATGAAAATGTAATGGCCCTCAAAGATATCATACGACCTCCACAGAAGGAGAGTTTCAATGATGTGTACATTGTTTATGAGTTAATGGACACTGATCTGCATCAAATAATACATTCCAATCAACCATTGACTGATGATCATTGTCGGTATTTTCTGTATCAGTTGTTACGGGGACTCAAATATGTACACTCAGCAAATGTTTTGCATCGTGATTTAAAGCCTAGCAATTTGCTCCTCAATGCCAATTGTGACCTTAAGATTGGAGACTTTGGGCTTGCTAGAACTACATCTGAAACTGATTTTATGACCGAGTATGTGGTTACTCGATGGTACCGAGCTCCAGAATTACTTCTTAATTGTTCAGAATATACTGCAGCCATTGATATATGGTCTGTTGGTTGCATCCTTGGTGAAATCATGACTAGACAACCCCTCTTCCCTGGCAAAGATTATGTCCATCAGCTGAGACTGATCACAGAGCTTATAGGTTCGCCTGATGACACCAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATATGTAAGACAGCTTCCACAATATCCAAGACAACAATTTTCTGCTAGATTTCCCAACATGTCTCCTGGTGCTGTTGATTTACTGGAGAAGATGCTTGTCTTTGATCCGAACAGGCGCATTACAGTTGACGAGGCTCTGTCCCACCCATACTTGGCACCTCTCCACGATATAAATGAGGAACCTGTTTGTCCCAGACCTTTCAGTTTTGATTTTGAGCAACCATCATTTACCGAAGAAGATATCAAGGAACTTATCTGGAGAGAATCTGTGAAGTTCAATCCTGATCCACCAATTTACTGA 1128 0.4264 MSAESVFSSADHNIKGLPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGASGIVCAAVNAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVMALKDIIRPPQKESFNDVYIVYELMDTDLHQIIHSNQPLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDNARRYVRQLPQYPRQQFSARFPNMSPGAVDLLEKMLVFDPNRRITVDEALSHPYLAPLHDINEEPVCPRPFSFDFEQPSFTEEDIKELIWRESVKFNPDPPIY 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0772 375 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi06g0772 375 CDD STKc_TEY_MAPK 34 370 - -
Glsi06g0772 375 Gene3D Transferase(Phosphotransferase) domain 1 125 354 - -
Glsi06g0772 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 39 328 - -
Glsi06g0772 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Glsi06g0772 375 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Glsi06g0772 375 FunFam Mitogen-activated protein kinase 26 136 - -
Glsi06g0772 375 SUPERFAMILY Protein kinase-like (PK-like) 44 334 IPR011009 -
Glsi06g0772 375 SMART serkin_6 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0772 375 Pfam Protein kinase domain 45 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0772 375 FunFam Mitogen-activated protein kinase 125 354 - -
Glsi06g0772 375 Gene3D Phosphorylase Kinase; domain 1 24 364 - -
Glsi06g0772 375 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0772 Glsi-ChrGlsi06 7810217 7815653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0772 1 370 MAP Kinase Gene Family AT4G01370 87.903 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi06g0772 Pkinase 4.6e-70 CL0016