Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0770 ATGTCGGTCTACGACGCCGCTTTCGTCGATACAGAGCTCTCCAAACGGACCTCAATCTTCGGTCTCCGACTCTGGGTCGTGATCGGAATCTTCGTTGGCTCAATCATTGTCCTCACTCTCTTCCTTCTCTCCCTCTGCCTCACCTCCCGCCGCCACCGTCGCCGTGGCAGCGTCGATCCCAAGAAGCTTTACGACCCCGCTCCTGTTGTATCAAAGGAAATCCAGGAGATCGTGCACCTCCCGGTGCCACCGCAGCCGGAGATCCACGTGGACATCGGAAAAGCCGAGCACCGAGTAGTGGTATTCTCTGATCGGGTTTCCAGCGGAGAGAGTAAAGATACAGCTACCGCGAGTGCTTGTGAAACGACGTCGTCTTTTGGTAGTGGGAGTATTGGGCCAGAGGTTTCGCATCTGGGGTGGGGAAGATGGTACACTTTAAGAGAGCTTGAGGCTGCCACTAATGGGTTGTGTGAAGAAAATGTGGTTGGGGAAGGTGGGTATGGAATAGTGTACCGTGGAGTGCTCAGTGATGGTACTAGAGTTGCCGTCAAGAACCTATTGAATAACAAGGGCCAAGCTGAGAAAGAATTTAAAGTGGAGGTAGAAGCAATTGGTCGTGTGCGGCACAAGAACCTTGTTAGGCTGCTTGGATACTGTGTTGAGGGAGCTTACAGGATGCTTGTGTATGAGTATGTTGACAATGGTAATCTAGAACAGTGGCTTCATGGGGATGTTGGAACTGTAAGCCCTTTGACATGGGATATCCGTATGAACATCATCTTGGGAACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTTGAACCAAAGGTTGTCCACCGAGATGTGAAAACTAGCAACATACTTATTGATCGCCAATGGAACCCCAAGGTTTCTGATTTCGGGCTTGCTAAGCTCCTGTGTTCTGAGAATAGTTATGTCACAACTCGAGTAATGGGGACATTTGGTTATGTTGCACCAGAGTATGCCTGCACCGGAATGCTGACTGAGAAAAGTGATGTTTATAGTTTCGGAATCCTCATAATGGAGATAATAACTGGAAGAAGTCCTGTTGATTATAGTAAACCACAAGGAGAGGTTAATTTAATAGAGTGGTTAAAAACTATGGTTGGAAACCGAAAATCCGAGGAAGTAGTTGATCCTAAGCTCCCAGATATGCCAACTTCAAAGGCTCTTAAACGCGCTCTGCTGGTTGCTCTTCGATGTGTTGATCCCGATGCAACAAAGAGGCCTAGAATGGGGCATGTCATCCACATGCTTGAGGCAGACGACCTGCTATTCCGTGATGAACGCCGGATTGGGGAAGAATCATCCCGTTCCCATCGTGATTATCAACAAGAGCACAAGGACTCAAATTTAGGTAAAAAAAGGATAGGTGGAGGAGGAGGGATCACCGATCAAAGTGAAGAAGAAGATATTAGTAGAAACCATCATCAGCCAAGTAGGTGGAGTGACTTGGTAACAACTCAGAAAGATGTGCCACGTTGGATGTCTGGGCCCACTCTGTTGACGTTTCTTAGACGGCCTTTTACGGAGTTGTCGCCACGTGGTAGGAATCGTACGGAAGTGAAATCATGTGAGCCGTCAGATTCTGTGGAAAAAAGGAAATTGTTGGATGGGGAATGGGAAGAAGTGGGGTTTTGGAATATGATGCATGAAATGGATGTTGAGATCTATATTTGGATTTACTTGCTATTTGGCAATGTTGTGTATCTTACTTTTCATTTTTGCTTGTCACACAGTAAAAAAAAAAAAGACAAAAAAATGAGCCGACCACAGGATCTACACCGATCTTTCTTCCCTTTTGGAAACCCTTTCCGGATGATATCTCCTAAAGGCTCTCACATGTCATCACATCTTCTTGCAATATTAAATTCTTTTGAGGCAACGTTAGCAGAGAGGCTGAGAAAGCTTATGCCCAAAAACAAGGATGAAATTCTCAGCTTGTCTTGGATGACTTTAGCAATGGAGTCGCTTTGTGAAACTCATAATGACATAAAAACCCTTATAACAGATCTTGAGCTGCCTGTGCGTGATTGGGATGAAAAATGGATTGATGTGTACTTGGACATAAGTGTGAAGTTGCTAGATATGTGCATTATATTTAGTTCTGAGCTCTCACGTCTGAACCAGGGGCATCTCTTGCTTCAGTGTGCATTGCACAATTTAAACTCTGCCTCCTCAAAGCAGTTTGTTCAGGCATGTTCTTCACTTGATAGTTGGAGGCAGCATATTAATTCCAAGAACCCGAGGATTGAGAAATGTGGCACCATTTTAGATAATCTTATGGGATCACTTGATCTGCCGAAGGTTAAGAATTCAGCCAAAGGGAAGGTTTTGATGCAAGCTATGTATGGAGTTAAGGTGGAGACAGTATTTTTATGCAGTGTATTTGCTGCAGCTTTCTCAGGCTCCGCAGAGAAGTTGTTAGATTTGAATGTGGCTGACATGTATTCATGGGCTCCAGCTTTTACAAGTTTGCGGAATCTTGTAAATGAGGAAATTAGAGTTATATTTTGCAATGGAAGATTTACCGCATTGAAAGAGTTGGAATCAGTTGATGCCATTGTAAAGAAATTATATCCTACAGTCCAGGGTAGTGTAGATACTGTTGAGACAGAAACACATCTGAAGATTGTTGAGGAAACAGGCAGGGCAGTGGAGAAGCTTTCGCAAGGATTGGACCTTCTTGCAAAGGGAGTGGATGGTTTTTTCCAAGTAGTTTTGGCTGCTCGCGATGCTTTGTTATCTAATCTGAGGTCAGGTGCAACTGTTTGTGACCGCATCCCAGGTGGTACTATAGATGGGCAAACAGTCAATTGA 2844 0.4483 MSVYDAAFVDTELSKRTSIFGLRLWVVIGIFVGSIIVLTLFLLSLCLTSRRHRRRGSVDPKKLYDPAPVVSKEIQEIVHLPVPPQPEIHVDIGKAEHRVVVFSDRVSSGESKDTATASACETTSSFGSGSIGPEVSHLGWGRWYTLRELEAATNGLCEENVVGEGGYGIVYRGVLSDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGTVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKTSNILIDRQWNPKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSKPQGEVNLIEWLKTMVGNRKSEEVVDPKLPDMPTSKALKRALLVALRCVDPDATKRPRMGHVIHMLEADDLLFRDERRIGEESSRSHRDYQQEHKDSNLGKKRIGGGGGITDQSEEEDISRNHHQPSRWSDLVTTQKDVPRWMSGPTLLTFLRRPFTELSPRGRNRTEVKSCEPSDSVEKRKLLDGEWEEVGFWNMMHEMDVEIYIWIYLLFGNVVYLTFHFCLSHSKKKKDKKMSRPQDLHRSFFPFGNPFRMISPKGSHMSSHLLAILNSFEATLAERLRKLMPKNKDEILSLSWMTLAMESLCETHNDIKTLITDLELPVRDWDEKWIDVYLDISVKLLDMCIIFSSELSRLNQGHLLLQCALHNLNSASSKQFVQACSSLDSWRQHINSKNPRIEKCGTILDNLMGSLDLPKVKNSAKGKVLMQAMYGVKVETVFLCSVFAAAFSGSAEKLLDLNVADMYSWAPAFTSLRNLVNEEIRVIFCNGRFTALKELESVDAIVKKLYPTVQGSVDTVETETHLKIVEETGRAVEKLSQGLDLLAKGVDGFFQVVLAARDALLSNLRSGATVCDRIPGGTIDGQTVN 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0770 947 CDD STKc_IRAK 162 428 - -
Glsi06g0770 947 FunFam Probable serine/threonine-protein kinase At1g01540 136 231 - -
Glsi06g0770 947 MobiDBLite consensus disorder prediction 442 462 - -
Glsi06g0770 947 Gene3D Phosphorylase Kinase; domain 1 138 231 - -
Glsi06g0770 947 ProSiteProfiles Protein kinase domain profile. 156 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0770 947 Pfam Protein kinase domain 159 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0770 947 SMART serkin_6 156 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0770 947 PANTHER OS01G0323000 PROTEIN 8 455 - -
Glsi06g0770 947 FunFam Putative receptor-like serine/threonine-protein kinase 232 442 - -
Glsi06g0770 947 SUPERFAMILY Protein kinase-like (PK-like) 134 428 IPR011009 -
Glsi06g0770 947 ProSitePatterns Protein kinases ATP-binding region signature. 162 184 IPR017441 GO:0005524
Glsi06g0770 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Glsi06g0770 947 MobiDBLite consensus disorder prediction 442 491 - -
Glsi06g0770 947 Pfam Protein ROH1-like 630 731 IPR008511 -
Glsi06g0770 947 Gene3D Transferase(Phosphotransferase) domain 1 232 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0770 Glsi-ChrGlsi06 7795886 7806927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0770 26 428 Trihelix Transcription Factor Family AT5G38560 40.587 9.37e-90 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Glsi06g0770 Pkinase 1.3e-46 CL0016