Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0751 ATGGAGGACGATTGGGATCTCCACGCTGTGGTCAGAGGCTGCGCCACCGTAACCTCCGCCGCCGCCGCCGCCTCCAGCACCGCCAGCACCTCTTACTCTGTGTTATCCTCTGAATTTGGGGCTTGTTATGCTTCCTGCGGTTTTCCTATGTTTGGTAGTGAAAGAATGGGCCAAGTTTCGTCCCTTTCAGACCCTTTTCAAGCAAGGAGTTCCACTGAAGAATTGCATGAGCTTTGCAAACCTTTCTTCCCCAAATCACAGCCTCCACCGTTACAAACTCCTCCTCCTCCTCCTCCGCCTCTGTCTTCTTCCTTCTCTTTTTCCTCTGCACCCAAATCAGTTCTACCACAGCACCAAAAAAACCAGCAGCCTCATAAGCTCTCTCACTCTGGCTCTGTCACCACCCCAAGATCTAAAAGAAGGAAGAACCAGCTCAAGAAAGTGTGTCAAGTTCCAGCTGAAGCGCTTTCTTCAGATATATGGGCATGGCGGAAATACGGCCAGAAACCCATCAAAGGGTCTCCATATCCAAGGGGATATTACAGATGTAGCAGCTCAAAAGGATGCTTAGCTAGGAAACAGGTGGAGAGGAACAGATCAGACCCAACAATGTTCATAGTAACCTATACGGCGGAGCACAACCACCCAGCTCCGACACATCGGAATTCTCTTGCTGGTTCAACACGCCAGAAGTCATTGACACCCCAAACGGCCGCCGCCGGCGACTCTGACAAGCCCCTGAAAAAACCCAGTTCTCCGGCGACCTCTGGGATGGAAGAAGAGCTTGGACCTCAAAGTACAAAGTCAGAAAGCAAAGAAGAAATGGAAGATTTGATGGATGATGAGGAAGGAGATCAATTTGGGTTATCAGATATGGTGTTAACTGATGATTTCTTTGAAGGTTTAGATGATCTAACAGGGCCGGTGGTGGCGATGGCCGCCACCGCCGTAGACTGCTTCTCTGACCCCTTTTCAGCTGGTATTGCTCTTCCTGCTTGGAATGCTGCCACTGCCGCTGGTGGCATCTGA 1029 0.5063 MEDDWDLHAVVRGCATVTSAAAAASSTASTSYSVLSSEFGACYASCGFPMFGSERMGQVSSLSDPFQARSSTEELHELCKPFFPKSQPPPLQTPPPPPPPLSSSFSFSSAPKSVLPQHQKNQQPHKLSHSGSVTTPRSKRRKNQLKKVCQVPAEALSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKSLTPQTAAAGDSDKPLKKPSSPATSGMEEELGPQSTKSESKEEMEDLMDDEEGDQFGLSDMVLTDDFFEGLDDLTGPVVAMAATAVDCFSDPFSAGIALPAWNAATAAGGI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0751 342 MobiDBLite consensus disorder prediction 83 104 - -
Glsi06g0751 342 Pfam WRKY DNA -binding domain 159 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g0751 342 SUPERFAMILY WRKY DNA-binding domain 155 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g0751 342 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 306 IPR044810 GO:0003700
Glsi06g0751 342 MobiDBLite consensus disorder prediction 212 281 - -
Glsi06g0751 342 Gene3D WRKY domain 141 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g0751 342 MobiDBLite consensus disorder prediction 215 239 - -
Glsi06g0751 342 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g0751 342 MobiDBLite consensus disorder prediction 105 134 - -
Glsi06g0751 342 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g0751 342 FunFam WRKY transcription factor 22 141 211 - -
Glsi06g0751 342 MobiDBLite consensus disorder prediction 82 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0751 Glsi-ChrGlsi06 7350061 7351353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0751 1 342 WRKY Transcription Factor Family AT4G01250 48.179 5.69e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi06g0751 WRKY 3.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0751 06 7350061 7351353 Glsi01g1440 01 73456778 73458076 ECH
Glsi06g0751 06 7350061 7351353 Glsi06g0751 06 7350061 7351353 ECH