LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi06g0743	ATGGAAAGGCAGCAGGACCCACCAAACCTCCCGGCGCTGCCTCAAAACCCTACCTTTTTGTTCCCGGCGCCGCCGCTGCCGGCCTCATCGGGGCTGCAAAATCCTTTGGACCCTCATGAAGGCCTTCTCGACGTTGACTGGGTTAACCTTTTCTCTGGCCAAAATGGATTGCTTGGAGTTGGGAATACTACGAAGCCAATAATGGAAGGTGCTTTATCGTCGTCTTCTTTCATGGGTGAAAATGCAGGCAAACATGAGGATGAAAAGGGGAATATTAAGGAGAAAAGGAGAGGTGGTAGAGTGAAGAAAACGACGAGACCTAGGTTTGCGTTTCAGACGAGAAGTGCAGATGATATTCTCGACGATGGTTACCGTTGGAGAAAATATGGACAGAAAGCTGTGAAGAATAGCATGTATCCCAGAAGCTACTATCGGTGCACGCACCACACATGCAGTGTGAAGAAACAGGTGCAGAGGTTGTCGAGAGACACAAGCATAGTATTGACAACTTACGAGGGAATCCACAACCACCCTTGCGAGAAGCTCATGGAAACCCTAACTCCTCTTCTCAGGCAAATGCAGTTCCTCTCTAGCTTCTAG	600	0.49	MERQQDPPNLPALPQNPTFLFPAPPLPASSGLQNPLDPHEGLLDVDWVNLFSGQNGLLGVGNTTKPIMEGALSSSSFMGENAGKHEDEKGNIKEKRRGGRVKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNSMYPRSYYRCTHHTCSVKKQVQRLSRDTSIVLTTYEGIHNHPCEKLMETLTPLLRQMQFLSSF	199

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi06g0743	199	Gene3D	WRKY domain	105	179	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Glsi06g0743	199	Pfam	WRKY DNA -binding domain	121	178	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Glsi06g0743	199	FunFam	WRKY transcription factor 57	106	180	-	-
	Glsi06g0743	199	ProSiteProfiles	WRKY domain profile.	115	180	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Glsi06g0743	199	MobiDBLite	consensus disorder prediction	81	95	-	-
	Glsi06g0743	199	MobiDBLite	consensus disorder prediction	75	104	-	-
	Glsi06g0743	199	SUPERFAMILY	WRKY DNA-binding domain	113	179	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Glsi06g0743	199	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	81	181	IPR044810	GO:0003700
	Glsi06g0743	199	SMART	WRKY_cls	120	179	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi06g0743	Glsi-ChrGlsi06	7296836	7298183	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi06g0743	88	199	WRKY Transcription Factor Family	AT5G41570	69.643	1.24e-55	172

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Glsi06g0743		WRKY	2e-25	CL0274