Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0737 ATGTCCTCCTCCGCCGCCACCTTCCTCTCCAACATCGGCCTCGGCTACTCCATCGCCATCGCCCTTGGCTTCCTTGTCCTTCTCTCCACCCTACTCCTCACTTCCTACCTTTGCTGCCGCGCCTCCCGCGCCGCCCACAACTCCAACCCGAATACCCACCCGAACAATTCAGATTCTGACGGTATCGTTCTGCCCCGCATAATCTTCGTGGCCCAGGACGACGAAAACCACCAGCGCGACGATGAAAACGTCATCGTCGTGGGTCTCGACCAGAACGTCATCAACTCCTACCCGAGGTTGCAGTACAGCAAGGACACCTTCACCGGTGCCGGCGCCAGAAATAACACTACGTGCTCGATCTGTTTGTGCGAGTACAAGGATTCGGAGATGCTGAGGATGATGCCGGAGTGTCGCCATTACTTCCACCTCTGTTGCCTCGATGCTTGGCTGAAGCTCAATGGGTCCTGCCCCGTTTGCCGGAATTCTCCACTTCCTACACCTCTATCGACGCCGTTGCAGGAGGTGGTGCCTCTGTCTCAGTACGCAGCTGATCGGAGACGATGGAGGTGA 570 0.5754 MSSSAATFLSNIGLGYSIAIALGFLVLLSTLLLTSYLCCRASRAAHNSNPNTHPNNSDSDGIVLPRIIFVAQDDENHQRDDENVIVVGLDQNVINSYPRLQYSKDTFTGAGARNNTTCSICLCEYKDSEMLRMMPECRHYFHLCCLDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRRRWR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0737 189 SMART ring_2 118 159 IPR001841 -
Glsi06g0737 189 PANTHER RING-H2 FINGER PROTEIN ATL67 4 187 IPR044289 GO:0016567|GO:0016740
Glsi06g0737 189 Pfam Ring finger domain 117 160 IPR001841 -
Glsi06g0737 189 SUPERFAMILY RING/U-box 117 165 - -
Glsi06g0737 189 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Glsi06g0737 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 164 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0737 Glsi-ChrGlsi06 7253870 7254439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0737 13 180 C3H Transcription Factor Family AT5G06490 40.462 1.26e-38 129