Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0714 ATGCAAGACATTGAGATCATCAGAGATATATACATACTGAGGACAACACGTGCTACTTCCATTACTATTGATCTCTCTTCTGCTCCCTCTTTCCATGAATTGGGGCCTCATTTTCTGCTTTGTTTTTCCTCGAGAAAAAAAAATGCCATCATTCAAGCCGCGGCAGCTAGGATTCATGCCGATAAATGTGCTTTCTTTGGTTGTGGTTTCCTTGGAATGCAAGACACCCTGTATGATTCTGATGGCCACCATTATTACCATAACTACTACGTTAAGAGAAAGCTTCATGTTTGTGGAGACGCGTGTGCCGTGGATGAAGCACTTAATGGAGCTGAGCTTGAGAAGTTGTTGAATATCTCTTTCTTGACGAAGAAGGGTGGATTCAAAAATTACCAACTATGGTCTTCATTTGAATCACTTGGATGA 426 0.4131 MQDIEIIRDIYILRTTRATSITIDLSSAPSFHELGPHFLLCFSSRKKNAIIQAAAARIHADKCAFFGCGFLGMQDTLYDSDGHHYYHNYYVKRKLHVCGDACAVDEALNGAELEKLLNISFLTKKGGFKNYQLWSSFESLG 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0714 141 Gene3D - 14 96 IPR012334 -
Glsi06g0714 141 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 32 106 - -
Glsi06g0714 141 Pfam Pectinesterase 48 104 IPR000070 GO:0030599|GO:0042545
Glsi06g0714 141 SUPERFAMILY Pectin lyase-like 21 94 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0714 Glsi-ChrGlsi06 6986089 6989755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0714 52 95 Carbohydrate Esterase AT1G05310 50.000 1.35e-09 53.1