Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0700 ATGGGAAACAGTGAGGAAGGGAAGTCTACTAAAGCTGAAAAGCCTTCTTCACCTGTAACAACAGATCAGGCCAACCAGATCAACCAGACCAATCTTCATCTCTACCCTGATTGGGCTGCCATGCAGGCATATTATGGGCCAAGAGTCCCCATACCACCTTACTACAACTCAGCTGTAGCTTCTGGTCATGCTCCTCACCCTTACATGTGGGGACCACCACAGCCTATGATGCCACCCTACGGGCCACCTTATGCAGCAATTTATTCACATGGAGGTGTTTATACTCACCCTGCAGTTCCTATTGGGCCACATCCACATGGTCAAGGAGTTCCATCTTCCCCTGCAGCTGGAACTCCTTTAAGCATGGAGACAGCAACCAAATCGTCTGGAAATACTGATAAGGGTTTCATGAAGAAATTGAAAGGGTTTGATGGGCTTGCAATGTCAATAGGCAATGGCAATGCTGAGAGTGCTGAGCGTGGAGCCGAAACTAGGCTGTCACAGAGTGAGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGTTGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGGGAGGGAACACCAACCACTGATGGAGATAGGAAGGCCAGTCCAGTTTCTAAAGAGGCTGCAGCTTCCAATAAGATGATGTCAGTTACCCCTGCCAGTGTTGCAGGAAAATTAGCTGGACCTGTAGTTTCTTCAGGCATGACCACAGCACTGGAGCTAAGGAACCCTCAGACTGTTCCCTCAAAACCAAATCCCATAAATGTCCCACAACCTTGTCCAGTATTGCCTTCTGAAGCTTGGATGCAGAATGATCGTGAGCTGAAACGTGAGAGGAGGAAACAATCAAATCGAGAATCTGCTAGAAGGTCCAGGCTAAGGAAGCAGGCTGAGACTGAAGAGCTTGCACGAAAAGTTGAATCCTTGAATGATGAGAATGTGACTCTAAAATCAGAAATAAATCGATTGACTGAAAATTCTGAGAAACTGAGGGTGGAAAATGCTACATTGATGGAAAAACTGAAAAATGCACAACAGGGACGAACAGAAGAAATAGTTTTGAACAGCATTGACAGCAAGAGGTCTACACCGATAAGCACAGAAAACTTGCTATCTAGAGTTAATAATTCCACTTCTAATGATAGAACTGCAGAGGATGACAATGATTTTTGTGACAACAAACCAAACTCTGGTGCAAAGCTGCATCAACTTCTGGATACAAGTCCTAGAGCTGATGCTGTGGCGGCTGGCTGA 1272 0.4599 MGNSEEGKSTKAEKPSSPVTTDQANQINQTNLHLYPDWAAMQAYYGPRVPIPPYYNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYTHPAVPIGPHPHGQGVPSSPAAGTPLSMETATKSSGNTDKGFMKKLKGFDGLAMSIGNGNAESAERGAETRLSQSEDTEGSSDGSDGNTVGANQTRRKRSREGTPTTDGDRKASPVSKEAAASNKMMSVTPASVAGKLAGPVVSSGMTTALELRNPQTVPSKPNPINVPQPCPVLPSEAWMQNDRELKRERRKQSNRESARRSRLRKQAETEELARKVESLNDENVTLKSEINRLTENSEKLRVENATLMEKLKNAQQGRTEEIVLNSIDSKRSTPISTENLLSRVNNSTSNDRTAEDDNDFCDNKPNSGAKLHQLLDTSPRADAVAAG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0700 423 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 394 IPR044827 GO:0003700|GO:0006355|GO:0043565
Glsi06g0700 423 MobiDBLite consensus disorder prediction 114 133 - -
Glsi06g0700 423 MobiDBLite consensus disorder prediction 168 188 - -
Glsi06g0700 423 SMART brlzneu 278 342 IPR004827 GO:0003700|GO:0006355
Glsi06g0700 423 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Glsi06g0700 423 Gene3D - 281 334 - -
Glsi06g0700 423 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 280 343 IPR004827 GO:0003700|GO:0006355
Glsi06g0700 423 Pfam Disordered region downstream of MFMR 133 259 - -
Glsi06g0700 423 SUPERFAMILY Leucine zipper domain 281 337 IPR046347 GO:0003700|GO:0006355
Glsi06g0700 423 Pfam bZIP transcription factor 279 340 IPR004827 GO:0003700|GO:0006355
Glsi06g0700 423 MobiDBLite consensus disorder prediction 380 423 - -
Glsi06g0700 423 MobiDBLite consensus disorder prediction 151 223 - -
Glsi06g0700 423 MobiDBLite consensus disorder prediction 13 28 - -
Glsi06g0700 423 MobiDBLite consensus disorder prediction 189 209 - -
Glsi06g0700 423 CDD bZIP_plant_GBF1 283 331 IPR045314 GO:0003700|GO:0006355
Glsi06g0700 423 MobiDBLite consensus disorder prediction 247 310 - -
Glsi06g0700 423 MobiDBLite consensus disorder prediction 276 310 - -
Glsi06g0700 423 Coils Coil 298 353 - -
Glsi06g0700 423 MobiDBLite consensus disorder prediction 1 28 - -
Glsi06g0700 423 MobiDBLite consensus disorder prediction 103 136 - -
Glsi06g0700 423 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 285 300 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0700 Glsi-ChrGlsi06 6756495 6760073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0700 1 423 bZIP Transcription Factor Family AT2G46270 51.389 2.66e-122 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi06g0700 MFMR_assoc 2.1e-24 No_clan