Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0694 ATGAAGGAAACCAGGTTCTCCGAGCAGAGAATTGTCACAAAGAAGCTTGTGAAATCTGGGTTTCCCACTGGAGCTTCAAGGGTGATTCGCATTTCTGTCACTGACAACTACGCCACTGACACTTCCAGTGACGAAGAAGACGAACAACCCAGAACGAAGAAGATTATCAACGAAATCAGAATCGAGAATTGTTCAGATTTCACAGTGACCCGTGAGGCTCATGGAGGTTTATCAAATGCTTCACTGAAACAAAAGCCGAAACAATGCAGAAACATGGCTGGTAAGGTGAAACCCACCCGACCCGAACGGGTTGCTTCGAATGGGAAGAAGTATCGCGGGGTTCGGCAGCGGCAGTGGGGGCGGTTCGCGGCGGAGATCAGAGATCCGGTGCGGCGGGAGAGAGTGTGGCTGGGTACCTTCGATACGGCGGAGGAAGCTGCTTTGGTTTATGACAGAGCAGCAATTCGTCTCCGAGGTTCTGATGCTATGACAAATTTCCTCAAACCACCCGAGAAATCCCAGGAATTCGAAGATACCCAGAAGAAAAATAATGGGTTGAAAGGGTTTTCGGAGAGTGATTGTGTTTCGAATTGTGGGTATGATTCAGGTAAAGAGACACGCGGTTCATCTTCACCAACGTCTGTTCTTAGGTTTCAGGAACCCATGAAAGAGTGCATAGAAGAACCATTTTTACAAGAAGATAGCTTTTTGTTTCTAGATTCTTCTCCATCTGTTAGTCCTTATTCAGATTCTGAAATCCCTCCTCCAATGTTCTTCGAAGAATCCAGTGTACCCCAATTCATTGGCAATGACAATTTCAGAGACATTCCCTTTCACCTCGATCAAGATTTTGAATCTTGTAAATGGGACGTAGACAATTACTTTCAAGAGCCTTTGCAGCTGCAATGA 909 0.4598 MKETRFSEQRIVTKKLVKSGFPTGASRVIRISVTDNYATDTSSDEEDEQPRTKKIINEIRIENCSDFTVTREAHGGLSNASLKQKPKQCRNMAGKVKPTRPERVASNGKKYRGVRQRQWGRFAAEIRDPVRRERVWLGTFDTAEEAALVYDRAAIRLRGSDAMTNFLKPPEKSQEFEDTQKKNNGLKGFSESDCVSNCGYDSGKETRGSSSPTSVLRFQEPMKECIEEPFLQEDSFLFLDSSPSVSPYSDSEIPPPMFFEESSVPQFIGNDNFRDIPFHLDQDFESCKWDVDNYFQEPLQLQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0694 302 FunFam Ethylene-responsive transcription factor 2 109 168 - -
Glsi06g0694 302 CDD AP2 109 166 IPR001471 GO:0003700|GO:0006355
Glsi06g0694 302 Gene3D AP2/ERF domain 109 168 IPR036955 GO:0003700|GO:0006355
Glsi06g0694 302 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Glsi06g0694 302 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Glsi06g0694 302 MobiDBLite consensus disorder prediction 81 111 - -
Glsi06g0694 302 SUPERFAMILY DNA-binding domain 110 166 IPR016177 GO:0003677
Glsi06g0694 302 SMART rav1_2 110 173 IPR001471 GO:0003700|GO:0006355
Glsi06g0694 302 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 26 223 - -
Glsi06g0694 302 Pfam AP2 domain 110 159 IPR001471 GO:0003700|GO:0006355
Glsi06g0694 302 ProSiteProfiles AP2/ERF domain profile. 110 167 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0694 Glsi-ChrGlsi06 6716601 6717509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0694 1 299 AP2-EREBP Transcription Factor Family AT4G27950 38.730 6.02e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi06g0694 AP2 3.8e-13 CL0081