Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0688 ATGGAGCAATTTCGACAGCTTGGGGAGGCACTTGGAAGTTTGAAGGCTCTGATGGTATTCAAAGAAAATATCCAAATCAATCCGAGACAGTGTGGTCTACTGCTTGATGTCTTCAGCTTTGCGTATGAATTAATTGCAGATGAGATTAGACAGAATCTCAATTTCGAAGAGAAACATGGGAAGTGGAAAGTTCTTGAACAACCGTTGAGAGAGACCCACAGAATATTCAAAGAAGGAGAAGCTTACATTAAGCAGTGCTTGGAAGCAAAGAACAGGTGGGCTAAAGCCATTACCCTCTACCAGAACAAAGATTGTGTTGAGCTTTACATCCACAACTTGCTATGCTGCATTCCCATTGTTATTGAAGCAATTGAATCTGCAGGAGAATCATCAGGGTGGCATCAGGATGAGATGCAAAGGAAAAGAATCATCAACTCCAACAAGTACAGGAAAGAGTATAGAGACATGAAACTTTTCCAGTGGAAATTTGGGAAGCAATACCTTATTACTCAAGATTTTTGCAACCGTTATAACTCAGTTTGGAAGGAAGACATGTGGTTTATTATCAACAGAATCCATGAGAAGAAAATGTCGGGTTTGACGAAGTACGAGAAACTATTAACAGATAACCTCTTGATGAATTTAGAAGGATCAGAATCATCGGAGGGGAAGCTCCTGCCAAGTTCAATTTTGCTGGGGTCTAAGGACTACCAGGTGAGGAGAAGACTTGGAAATGGAGGTCAGTACAAGGAGATTATATGGTTAGGTGAAAGCTTTGTTTTAAGACATTTTTCTGGGGAGATTGGAAGTTTGGAACCAGAGATCACATCACTCTTATCCCTTTCCCATTCAAATATAATGGAATTCCTTTGTGGGTTTACTGATGAGGAGAAGAAAGAGTGCTTTTTGCTAATGGAACTGATGACCAAAAACCTCTGCACCCACATCAAAGAGATTTATGGCCCAAGGAAACGAATACCATTCGCACTTCCTGTGGCAGTCGATCTTATGCTTCAAATTGCCAGAGGAATGGAATATCTGCATTCAAAGAAAGTATATCATGGAGAGCTAAATCCTTCCAACATTCTTGTTAAACCCAGAGGTACGTCCACAGAAAGTTACCTGCATGCCAAAGTTTCAGGGTTTGGGCTATCTTCTGTTAAGAATTTGAATCAAAAAGGGGTTCCAAATCACAGTGGAACTCTTTCATTTATCTGGTATGCTCCAGAAGTTCTTGAAGAGCAAGAACAAACTGGGAAAACTGAGAATTCCAAGTACACAGAAAAATCTGATGTGTACAGTTTTGCAATGGTTTGCTTTGAGCTTCTAACTGGTAAAGTCCCTTTTGATGACAATCACCTTCAAGGGGACAAAATGAGCAGAAACATAAGGGCAGGAGAGAGGCCACTTTTTCCACTCAACTCACCAAAATTTCTCACAAACTTGACAAAAAGATGTTGGCATACTGATCCAAATCAACGGCCAAGCTTCTCTTCCATCTGTAGAATTCTTCGTTATATAAAACGGTTTATAGCAATGAATCCTGATTACAATAGCCAGCTAGATCCACCAGTGCCACCTGTAGATTACTGTGATTTGGAGTCTGTGATTTTGAGGAAGTTCCCTTCATGGGGAAATTCTGATCCATCACCAATATCACAAATTCCATTTCAAATGTTTGCCTACCGAGTTATAGAGAAAGAAAGAATAAGTTCAAGCTCTAAGGATAACTCTGAATCTGGAAGTGATGCTTCAGTCGGTGGTGATGAACATTTTACCTCTGGGGACGAAGCCTTTCCATCAATAACTGAAAGGAAGTCTTTGGTTGGATCTAATAGTATGAACAGGAAGCTTTCACAGACCAACAAATTGGATTTGAAAACCATCAGACAGCCAGTTGCACAAAAAGGACGATCAATTAGGCCTCCAAAAACATCTCTTTGTGCACGAAGCCTGAGACTGAGTTCAGAAAGTAGCCTGATGATGAGTCCAAGAATTAGAAGAACATCTTCTGGTCATGTCTCAGATTCCGAGCTTTCTTAA 2043 0.4038 MEQFRQLGEALGSLKALMVFKENIQINPRQCGLLLDVFSFAYELIADEIRQNLNFEEKHGKWKVLEQPLRETHRIFKEGEAYIKQCLEAKNRWAKAITLYQNKDCVELYIHNLLCCIPIVIEAIESAGESSGWHQDEMQRKRIINSNKYRKEYRDMKLFQWKFGKQYLITQDFCNRYNSVWKEDMWFIINRIHEKKMSGLTKYEKLLTDNLLMNLEGSESSEGKLLPSSILLGSKDYQVRRRLGNGGQYKEIIWLGESFVLRHFSGEIGSLEPEITSLLSLSHSNIMEFLCGFTDEEKKECFLLMELMTKNLCTHIKEIYGPRKRIPFALPVAVDLMLQIARGMEYLHSKKVYHGELNPSNILVKPRGTSTESYLHAKVSGFGLSSVKNLNQKGVPNHSGTLSFIWYAPEVLEEQEQTGKTENSKYTEKSDVYSFAMVCFELLTGKVPFDDNHLQGDKMSRNIRAGERPLFPLNSPKFLTNLTKRCWHTDPNQRPSFSSICRILRYIKRFIAMNPDYNSQLDPPVPPVDYCDLESVILRKFPSWGNSDPSPISQIPFQMFAYRVIEKERISSSSKDNSESGSDASVGGDEHFTSGDEAFPSITERKSLVGSNSMNRKLSQTNKLDLKTIRQPVAQKGRSIRPPKTSLCARSLRLSSESSLMMSPRIRRTSSGHVSDSELS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0688 680 ProSiteProfiles Protein kinase domain profile. 237 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0688 680 MobiDBLite consensus disorder prediction 605 628 - -
Glsi06g0688 680 MobiDBLite consensus disorder prediction 571 680 - -
Glsi06g0688 680 PANTHER SERINE-THREONINE PROTEIN KINASE 272 508 - -
Glsi06g0688 680 Gene3D Transferase(Phosphotransferase) domain 1 229 520 - -
Glsi06g0688 680 SUPERFAMILY Protein kinase-like (PK-like) 232 533 IPR011009 -
Glsi06g0688 680 FunFam Kinase family protein 234 517 - -
Glsi06g0688 680 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Glsi06g0688 680 Pfam Protein tyrosine and serine/threonine kinase 271 503 IPR001245 GO:0004672|GO:0006468
Glsi06g0688 680 MobiDBLite consensus disorder prediction 649 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0688 Glsi-ChrGlsi06 6663808 6666608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0688 268 508 MAP Kinase Kinase Kinase AT1G14000 35.484 2.89e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Glsi06g0688 PK_Tyr_Ser-Thr 1.3e-38 CL0016