Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0663 ATGGAAGAGACCACAAAGAGGGATCAACTTATTCTGATCAAAGAGCTAACCCAAGGGAAGGAACTAGCAAGCCAGCTCTCTACCCATTTGCTCTCTTCTTCTTCTTCTTCTTCTCATGAGACCAATGAGTCCTTGATTCAGAAGATACTTTCTTCCTATGAGAAAGCATTAAGTATATTAAACTTGGGACCAAATGTGGATTCCCATTTTTCTACTACTGCTAATGGAAGCCCCAAAAGTGAGGTCTTAGACCAGGAAGACAACCACAAAGATGTCTTCAAGAAAAGAAAGACCATGACCAGATGGACAGAGCAAGTGAAGGTTTGCTCAGGAACAGGGCTTGAAGGTTCTCTGGATGATGGTTATGGCTGGAGAAAATATGGCCAGAAGGATATTCTTGGAGCTAAATTTCCAAGAGGATACTACAGATGCACTCACAGACATGTACAAGGATGTCTGGCCACAAAACAAGTTCAAAAGTCTGATGAAGACCCAACAATATTTGAAGTAACCTACAAAGGAAGACACACTTGCTCCCAACCATCCTATTTGAACAAGGTGACAACATCAAAGGTAAAGAAGATGGATTTGGGAGAGAATCTTCATCTCCACTGCCATGAAAACAATCAACCTCAACAAGAAACAATAGTGGAACATTCCCCAGACACATTCTTCGGTTTTGGAGCAGAACTTGAAGTCAAAATGGAGGACATTTTCTCTCCATTTTGCTTTCCTTCTCAATCTGAAAACGAGGCCAACAATATTAACGTATTCTCTGAGACAATGGCAGAAAACTATTTCCTGGAAAACTTTTCTCCATGCCACCACTTGGGCGGTGCTGGAATAGGCCAAAACTTGCAAACTTCAGAATCTGATATTACTGAGATAGTTTCAGCTCCAACTTCAGTCACCAATTCTCCATTAGTGGATTTAGATCTCTGGTTTGATATGGGGGATTTCCATACGAACTTCCCTTTCAACACCCTTTCATAA 993 0.4119 MEETTKRDQLILIKELTQGKELASQLSTHLLSSSSSSSHETNESLIQKILSSYEKALSILNLGPNVDSHFSTTANGSPKSEVLDQEDNHKDVFKKRKTMTRWTEQVKVCSGTGLEGSLDDGYGWRKYGQKDILGAKFPRGYYRCTHRHVQGCLATKQVQKSDEDPTIFEVTYKGRHTCSQPSYLNKVTTSKVKKMDLGENLHLHCHENNQPQQETIVEHSPDTFFGFGAELEVKMEDIFSPFCFPSQSENEANNINVFSETMAENYFLENFSPCHHLGGAGIGQNLQTSESDITEIVSAPTSVTNSPLVDLDLWFDMGDFHTNFPFNTLS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0663 330 SUPERFAMILY WRKY DNA-binding domain 117 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g0663 330 Gene3D WRKY domain 103 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi06g0663 330 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 287 IPR044810 GO:0003700
Glsi06g0663 330 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g0663 330 FunFam WRKY transcription factor 53 104 181 - -
Glsi06g0663 330 Pfam WRKY DNA -binding domain 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi06g0663 330 ProSiteProfiles WRKY domain profile. 113 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0663 Glsi-ChrGlsi06 6340418 6342180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0663 16 196 WRKY Transcription Factor Family AT5G24110 46.409 2.75e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi06g0663 WRKY 1.3e-26 CL0274