Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0662 ATGGACAAGCGAGGCAGACGGCATGAAAAGACTCATGGTTCTTACTCTGAAGAAGTTAGCAGCATTGAGTGGGAGTTCATTAACATGTCACAGCAAGAAGAAGATCTCATTCACAGAATGTACAAACTGGTTGGAGACAGATGGGCACTTATAGCAGGGAGAATTCCAGGTCGGAAAGCTGAAGAGATAGAGAGGTTTTGGATAATGAGACATGGAGAAGTGTTTGCCAGCAGAAGAAAAATGCCTAGCAGATTATATAAATTCTAA 267 0.4195 MDKRGRRHEKTHGSYSEEVSSIEWEFINMSQQEEDLIHRMYKLVGDRWALIAGRIPGRKAEEIERFWIMRHGEVFASRRKMPSRLYKF 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0662 88 SMART sant 25 73 IPR001005 -
Glsi06g0662 88 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 28 69 - -
Glsi06g0662 88 SUPERFAMILY Homeodomain-like 30 71 IPR009057 -
Glsi06g0662 88 FunFam MYB-like transcription factor 28 70 - -
Glsi06g0662 88 CDD SANT 28 67 IPR001005 -
Glsi06g0662 88 Pfam Myb-like DNA-binding domain 29 68 IPR001005 -
Glsi06g0662 88 Gene3D - 30 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0662 Glsi-ChrGlsi06 6323561 6325321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0662 28 80 MYB Transcription Factor Family AT5G52600 50.943 1.73e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi06g0662 Myb_DNA-binding 5.4e-06 CL0123