Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0648 ATGATTCTGCAATCTCCCTCTCCGGTGTTTAGAGTGCAGAGGTGCAAACCAGAGCTGGTTGCTCCGGCTAAGCCGACTCCTCAAGAATTGAAGCCACTCTCTGACATTGATGACCAGGATGGTCTGCGTTTTCAAATCCCATTCATACTCTTCTATCCTTACCGGCCATCAATGGCAGGGAAAGACCATGTTCAAGTCATCAGAAAGGCACTGGCAGAGACACTAGTGTTTTACTACCCATTTGCAGGTAGGCTTCGGGAAGGTCCTGGTCGCAAACTTATGGTGGATTGTAATGGGGAGGGAGTTCTGTTCATTGAGGCCGATGCAGATGTCACGCTTCCCCAATTTGGTGATGCTCTTCATCCTCCATTTCCTTGCTTCCAAGAACTCCTTCATGATGTTCCTGGTTCTGAAGGAATCATCAACTGTCCCCTCCTGCTCATACAGGCAACACGCCTCAAGTGCGGTGGTTTCATCTTAGCTCTCCGACTGAACCACGCCATGAGCGACGGACCTGGTCTTGTTCAATTCTTGAAGGCCACGGCCCAAATAGCCAAGGGAGCTTCAAAACCTTCCATTCTCCCGGTATGGCATAGGGAGCTCCTAAGTGCAAGAAACCCACCACGAGTCACATGCATTCATCGCGAATACGAGCAATTGCACCATAACACTGAAACCATCTTCAAGCCAAAGCCACCGAAAGACATAGTTCATCGCTCTTTCTTCTTTGGCCCCACCCAGATAGCCGCCCTCCACCGTCTAGTTCCTCACCACCTTGCTCAGTCCACCACCACTTTTGAGGTCCTCACGGCATGCCTATGGCGTTGCCGCACTAGAGCATTGCACCCACCCCCGGAAGAGGAGGTGCGCCTGATGTACCCCGTTAGTGTACACACCAAGTTGAAGCCTCCATTGCCAGTGGGCTATAACGGCAATGGGTTTGTGTTCCCTGCCGCCGTCACCACCACCGGGAAGCTTTGCGAGAATCCATTTGGGTATGCTTTGGAGTTGATAAAAAAGGCAAAAGCTACAGTGGATGACGAGTATGTTCACTCCGTGACAGATTTAATGGTGATTAAGGGACGACCCCACCGTACTGTGGTGGGGTCCTTGGTTGTGTCGGATTTGACACGTGCCGGGTTTAAAGAGGTGGATTTTGGGTGGGGTAGGGCTGTGTATGGTGGGCCAGCCAAAGGTGTGACCTCGCTTGTTCCTGAAACGACAAGCCTTTACATAGCGTTTGAAAAGGCTAATGGAGAGAAAGGCACAGCGGTATCAGTTAGCTTGCCAGCTGAAGCCATGGAGAGGTTTGAAGGAGAGTTGGATGAGATGCTTAGGAGCCACGCACTGCCAACTGCTCCGAAAACCATATCTTCCCTCTAG 1383 0.5127 MILQSPSPVFRVQRCKPELVAPAKPTPQELKPLSDIDDQDGLRFQIPFILFYPYRPSMAGKDHVQVIRKALAETLVFYYPFAGRLREGPGRKLMVDCNGEGVLFIEADADVTLPQFGDALHPPFPCFQELLHDVPGSEGIINCPLLLIQATRLKCGGFILALRLNHAMSDGPGLVQFLKATAQIAKGASKPSILPVWHRELLSARNPPRVTCIHREYEQLHHNTETIFKPKPPKDIVHRSFFFGPTQIAALHRLVPHHLAQSTTTFEVLTACLWRCRTRALHPPPEEEVRLMYPVSVHTKLKPPLPVGYNGNGFVFPAAVTTTGKLCENPFGYALELIKKAKATVDDEYVHSVTDLMVIKGRPHRTVVGSLVVSDLTRAGFKEVDFGWGRAVYGGPAKGVTSLVPETTSLYIAFEKANGEKGTAVSVSLPAEAMERFEGELDEMLRSHALPTAPKTISSL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0648 460 Pfam Transferase family 12 443 - -
Glsi06g0648 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 438 - -
Glsi06g0648 460 Gene3D - 218 439 IPR023213 -
Glsi06g0648 460 Gene3D - 10 217 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0648 Glsi-ChrGlsi06 6184829 6187871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0648 43 444 Monolignol Biosynthesis Gene Families AT5G48930 29.808 3.45e-48 169