Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0593 ATGAACACCCACATTGATAACCTCTGGGTCTTCGCCTTAGCTTCCAAATGCACTCAAGAAAACATTGCATGGTCCCTTTTCATCATGGCCTTTCTCTGGTTGACCATGACCTTCTTTTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTACTGCTCTTACTACTACTCTACCTGGAGAAAATCAGGTACTTCTGCTGCTGGTCATACTGTCGTAGACCAGAAAAAGCGAATGATTCCTGGACCAAAAGGTTTGCCTCTAATTGGTAGCATGAGCCTCATGGCCTCACTTGCTCACCACCGTATTGCAGCCGCCGCAACGGCTTGCGGAGCCAGGAGGCTCATGGCGTTTAGCCTGGGCGAAACGCGGGTCATCGTCACGTGCCATCCGGACGTCGGCAAAGAGATTCTGAACAGCTCTGTGTTCGCTGATCGGCCGGTGAAAGAGTCCGCTTACAGCTTGATGTTCAACAGAGCAATTGGGTTCGCTCCTTATGGGGTTTACTGGCGAACTCTGAGGAGAATCGCCGCCGCTCACCTCTTCTGCCCCAAACAAATTAAAGCCTCCGAATCCCAAAGGGCCGAAATCGCCACCCAAATGGTGGGAATGTTAAGAAGTCATCAAGAACAGAGTTTCACTGTTCGCCAAGTGCTCAAGAAAGCGTCGCTTAATAACATGATGTGTTCGGTGTTCGGACAACGCTATAGGCTAGACGAGTCAAACACCGAAATGGATGAGCTAAAAGAGTTAGTTGATGAAGGGTACGACTTACTGGGTACCCTTAATTGGGGTGACCATCTTCCTTGGCTTGCCGATGTTGACGCTCAGAAAATCCGGTTCAGGTGCTCTAAACTCGTCCCTAAGGTGAACCGGTTCGTCAGTAGAATCATCGCTGACCACAGAGCCCAAAAAACCGAAACGAACCGGGATTTCGTCGATGTTCTGCTTTCCCTCCAAGAACCCGATAAACTAACCGACTCCGACATGATCGCAGTACTTTGGGAAATGATATTTAGGGGGACTGATACTGTGGCGGTTTTGGTCGAGTGGATACTAGCGAGGATGGTGCTTCATCCCGATGTGCAATCGAGGGTGCATGCAGAGTTAGATGAGGTCGTTGGGAGGTCACGTGCGGTCAAGGAGACGGACATGATGGCGATGGAGTATTTGCCGGCGGTGGTGAAGGAGGTGCTGAGGTTGCACCCGCCAGGCCCACTTCTCTCATGGGCTCGATTGGCCATCACCGATACGACCATTGATGGGTATCAAGTGCCTGCGGGGACCACGGCCATGGTGAATATGTGGGCTATCTGTAGGGACCCAGAAGTGTGGGTAGACCCACTAATATTTATGCCCGAGAGGTTTGTCACCAAAGGAGGAGTGTCAGGGGAGGTGGAGTTCTCAATTCTAGGGTCGGATCTAAGGCTAGCTCCGTTTGGGTCGGGTAGGCGAACGTGCCCAGGTAAGACATTGGGATTGACTACAGTGAGCTATTGGGTGGCGCGGCTTCTGCATGAGTACGAATGGCTACCGTCGGATCAGAGTGAAGTTGATTTATCGGAGGTGCTGAGCCTGTCTTGTAAAATGGCTCATCCTCTCACAGTTACGGTGCGCCCTAGACTTGAGATAAGCCATTCTCAATTACCTTAA 1656 0.5133 MNTHIDNLWVFALASKCTQENIAWSLFIMAFLWLTMTFFYWSHPGGPAWGKYYCSYYYSTWRKSGTSAAGHTVVDQKKRMIPGPKGLPLIGSMSLMASLAHHRIAAAATACGARRLMAFSLGETRVIVTCHPDVGKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAAAHLFCPKQIKASESQRAEIATQMVGMLRSHQEQSFTVRQVLKKASLNNMMCSVFGQRYRLDESNTEMDELKELVDEGYDLLGTLNWGDHLPWLADVDAQKIRFRCSKLVPKVNRFVSRIIADHRAQKTETNRDFVDVLLSLQEPDKLTDSDMIAVLWEMIFRGTDTVAVLVEWILARMVLHPDVQSRVHAELDEVVGRSRAVKETDMMAMEYLPAVVKEVLRLHPPGPLLSWARLAITDTTIDGYQVPAGTTAMVNMWAICRDPEVWVDPLIFMPERFVTKGGVSGEVEFSILGSDLRLAPFGSGRRTCPGKTLGLTTVSYWVARLLHEYEWLPSDQSEVDLSEVLSLSCKMAHPLTVTVRPRLEISHSQLP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0593 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Glsi06g0593 551 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 SUPERFAMILY Cytochrome P450 81 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 Pfam Cytochrome P450 82 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 CDD CYP78 114 535 - -
Glsi06g0593 551 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PRINTS E-class P450 group I signature 223 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0593 551 PANTHER CYTOCHROME P450 78A7-RELATED 1 542 - -
Glsi06g0593 551 FunFam Cytochrome P450 78A5 73 542 - -
Glsi06g0593 551 Gene3D Cytochrome P450 70 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0593 Glsi-ChrGlsi06 5619327 5621072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0593 1 542 Cytochrome P450 AT2G46660 66.606 0.0 729