Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0575 ATGGGGAAGAAGGGAGGTAGCTCATGGTTGACTGCTGTGAAAAGGGCATTTAGATCTCCAACCAAAGACAGTGACAAAAGAATTAGCAGAAGAAGAGAGGACCATGACCAAGAAGAAGACGAAGACAAGAAGAGAGAAAAACGAAGATGGATTTTCAGAAAAGCAGTAAATCAGGAAGCGGCGACGGTCAGTGCCCAACAAACCCCAACAAAGGGGAAGCCTGAAGTGGCTGCAATTGGGGCTTCAACGGTGGAGCATGTCTCTGTGACGGCGGCGGCGGCGGCAGATCAAACGCATGCACTTGCGGTGGCGGAGGCAGCCATGGCCACCGCTCAGGCTGCGGTGGAAGTGGCCAGATTGACCAGGCCTTCCAATCATGCTAGGGAGCACTATGCTGCTACCGTCATTCAAACTGCTTTCAGAGGATACCTATCAAGAGAAGGAAGCAGCATTGCAGATGACTGGGATGAACGCCCACATACAGTTGAAGAAGTTAAAGCCATGTTACAGCAGAGGAAAGAGACAGCTATGAAGCGAGAGAGATCCTTGTCTCAAGCTTTCTCTCAACAGATTTGGAGAAATGGTAGGAATTCATCAATCGGAAATGAAGACGAGCTGGAAGAGAGACCGAAATGGCTTGACCGGTGGATGGCTTCGAAGCCATGGGAGACCAGGGGAAGAGCTTCAACTGATCAAAGAGACACCATTAAGACTGTAGAAATTGACACTTCTCAACCCTACTCATATCTGGGGGCTAATTACAGAAGATCACATCCAAATTACCAATATATCCCCCACCAACCTCAACGACACTCAGTTGCTTCCCCACTCCACAGAACCCACCAAAATGGATCTCCTCACCAATCCCCTGCAACTCCATCTCCAGCTAAATCAAGGCCTATGCAAGTCCGGTCTGCGAGCCCTCGTTGTGGTAGAGAAGATAGAAGCTCAAGCTACCATACATCTCAAACACCAAGCTTGAGGTCCAATTACCACTATACTGGAAACTTGTACCACAGTGGTAGGGTGGGAACAAGTAATGGTGGGGTTACCTTGCCTAATTACATGGCGGCAACAGAGTCTGCAAAGGCCCGAATTCGCTCTCAGAGTGCGCCAAGGCAGAGGCCATCTACACCAGAGAGGGACAGAGCAGCAGGGTCCGCAAAGAAAAGGCTTTCATTCCCTGCTCCAGATCCTTATGGTGTAGGAATGGGTTATGGAAGTTACGGGCATAATTTAAGAAGTCCAAGCTTCAAGAGTGTGAATGCATCACACTTTGGGTTGGAGCAGCAGTCCAACTATTCTTCTTGCTGTACTGAGAGTCTTGGTGGTGAGATTTCTCCGTCTTCGACTGGTGACCTTAGAAGGTGGTTGAGATGA 1380 0.492 MGKKGGSSWLTAVKRAFRSPTKDSDKRISRRREDHDQEEDEDKKREKRRWIFRKAVNQEAATVSAQQTPTKGKPEVAAIGASTVEHVSVTAAAAADQTHALAVAEAAMATAQAAVEVARLTRPSNHAREHYAATVIQTAFRGYLSREGSSIADDWDERPHTVEEVKAMLQQRKETAMKRERSLSQAFSQQIWRNGRNSSIGNEDELEERPKWLDRWMASKPWETRGRASTDQRDTIKTVEIDTSQPYSYLGANYRRSHPNYQYIPHQPQRHSVASPLHRTHQNGSPHQSPATPSPAKSRPMQVRSASPRCGREDRSSSYHTSQTPSLRSNYHYTGNLYHSGRVGTSNGGVTLPNYMAATESAKARIRSQSAPRQRPSTPERDRAAGSAKKRLSFPAPDPYGVGMGYGSYGHNLRSPSFKSVNASHFGLEQQSNYSSCCTESLGGEISPSSTGDLRRWLR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0575 459 ProSiteProfiles IQ motif profile. 129 158 IPR000048 GO:0005515
Glsi06g0575 459 MobiDBLite consensus disorder prediction 1 47 - -
Glsi06g0575 459 MobiDBLite consensus disorder prediction 260 301 - -
Glsi06g0575 459 MobiDBLite consensus disorder prediction 18 47 - -
Glsi06g0575 459 MobiDBLite consensus disorder prediction 439 459 - -
Glsi06g0575 459 Pfam Protein of unknown function (DUF4005) 307 409 IPR025064 -
Glsi06g0575 459 PANTHER IQ-DOMAIN 5-RELATED 158 396 - -
Glsi06g0575 459 MobiDBLite consensus disorder prediction 317 333 - -
Glsi06g0575 459 MobiDBLite consensus disorder prediction 360 396 - -
Glsi06g0575 459 MobiDBLite consensus disorder prediction 258 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0575 Glsi-ChrGlsi06 5348328 5350485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0575 141 459 IQD Protein Family AT1G01110 57.485 3.89e-109 331