Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0566 ATGGGTGAAGTGGTTGTATTGAGCGGTGAAAAGGGGATGGAGGGTGGGTTGGATACACAGGAGGAGCTGAGCAAGAACCAACAGAAGGATGATGGCTTTGCAGAAGTCGTTAGTTGTGACAACTTTCTACCCCGGATGGTGCTCAGAGTTCTGCTTGTGGAAGCTGATGATTCTACTAGCCAGATTATCGCTGCCCTTCTCCGCAAATGTAGTCACAAAGTTGTTGCGGTACCTGATGGATTAAAGGCATGGGAGACATTGAAGAGGAAAGCTTCTGACATAGATCTCATATTAACTGAAGTGGAGTTGCCATCAATATCTGGATTTGCACTCCTTACGCTAATCAAGGAGCATGATTTTTGCAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCAATTAGCATGGCAATGAAATGCATATTCAAAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGTAAGAATGTCCTAATGACCTTGTGGCGACATGTGTGGAGAAGGCATCCTAAAAAAATTGAAGCTACTTCAGAAAACAATGCTGCAAGCAATCATTCTAGTGGTTTTGTGGCTTCCACACAGAAAAATAATGAATGCAGCCAGAAAGGGAGTGAGACCCAAGGTACATCCCAGCTGAGGAGTTCTTCAAATTTGAGCAACATTGACACGGGGAAGTATGAAGAGTCTACAAAACTTGAAAGGGAATCAGTTAAACAAAATGATGGAACAAGAAAGCGTGCTAGGTCCAACAGAACTATTAACTCGACGAATTCAAGGCTGGAACAAGACCGCAATTGTGCTGAATCAGAGAATCAAGATGAAGTTTTAAGAGTAGAGTTAGTCAGAGGCAATCCAAATTTTAATATAGATATTCATGGCTACAGAAATGAACTGATAGAACCTTCTAGAGGAGCTATTGACTTGATTGCTACATTCGAGAATCTTCCAAAGAATGCTGATGACAACTGTAGTCTTAATGATGGTGGCACAAACAAGTTTGATTTTGATCCTCAATTGGAACTTTCTTTAAGAAGGAATTTTACTGATAGCTCGTGTAAACAAGCAACTGAAGAAAGGCAAACATTGAACCGTTCAAATGCATCTGCTTTTGCTTGGTATGGTGGTAATAAATTATTGCAGCCCCTTTTTCCAGCACTGTCAATTAGTTCTGCTAAAGAATACAGTACTACTGAGTTCAATTCCCATAATTCCAATGATATATCTGGAATTGATACTTCTCGTCAGTATGGTGGAACAAATCATGATGAGGAGAATATGATCTCTCTGGTCATTGGTCAGTCTGGACCAGCTGAAATACAATTGCCAAACAGTCAAGTTGGATCTTTTCCTGCTACTGGTGTTACTTCTGACAAAAAGTCTAGTAGATATGGGAATGTTATACCTTCTCTGTTCTACACACAATCCGGTACTCATCCCATATGTAGTCCCAAACCAGCCTTCCAGAAAGAGGATTCTCCCCTTCCCAAAGGTACTTTGTTCCAGTCAAATGTTGAAAGTCACAACTCGGAACAAAATCATCACTCGCCCGAAGATGCCACCTATACTTCTCTTGATCAAGCTGTACATGATAAAACCTACTTGGATCCTACAAGGCATGATTCTGTTGCTGCTGGTCAGAGTACCAGCAATAGTTTATGCCTTGAAACTGTAAATCATATAAATAATGTTTCTTATGGAAGCATTGGCAACAGAAAAGATGGAAATTATACTTCAGGTGTGGTAGTTGAGAAAACCCCTGAAAGTTTTAGTGACAATCGTCATAGTTATGATGGATTTAATGGAACAGATTCTCAGCGTTCCAGCCAAAGGGAAGCAGCTCTAACGAAGTTTAGACTGAAGAGGAAAGACAGATGCTATGAGAAAAAGGTCCGATATCAAAGTCGGAAAAGACTGGCAGAGCAGCGCCCTCGGATTAAAGGGCAGTTTGTACGTCTGCAAAATGATTGTCCTGTCACTGATTCTGGAGGTGGTTCCTGA 2001 0.4088 MGEVVVLSGEKGMEGGLDTQEELSKNQQKDDGFAEVVSCDNFLPRMVLRVLLVEADDSTSQIIAALLRKCSHKVVAVPDGLKAWETLKRKASDIDLILTEVELPSISGFALLTLIKEHDFCKNIPVIMMSSHDSISMAMKCIFKGAADFLIKPVRKNVLMTLWRHVWRRHPKKIEATSENNAASNHSSGFVASTQKNNECSQKGSETQGTSQLRSSSNLSNIDTGKYEESTKLERESVKQNDGTRKRARSNRTINSTNSRLEQDRNCAESENQDEVLRVELVRGNPNFNIDIHGYRNELIEPSRGAIDLIATFENLPKNADDNCSLNDGGTNKFDFDPQLELSLRRNFTDSSCKQATEERQTLNRSNASAFAWYGGNKLLQPLFPALSISSAKEYSTTEFNSHNSNDISGIDTSRQYGGTNHDEENMISLVIGQSGPAEIQLPNSQVGSFPATGVTSDKKSSRYGNVIPSLFYTQSGTHPICSPKPAFQKEDSPLPKGTLFQSNVESHNSEQNHHSPEDATYTSLDQAVHDKTYLDPTRHDSVAAGQSTSNSLCLETVNHINNVSYGSIGNRKDGNYTSGVVVEKTPESFSDNRHSYDGFNGTDSQRSSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRIKGQFVRLQNDCPVTDSGGGS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0566 666 Gene3D - 46 277 - -
Glsi06g0566 666 ProSiteProfiles Response regulatory domain profile. 49 167 IPR001789 GO:0000160
Glsi06g0566 666 MobiDBLite consensus disorder prediction 227 249 - -
Glsi06g0566 666 MobiDBLite consensus disorder prediction 586 611 - -
Glsi06g0566 666 Pfam CCT motif 611 652 IPR010402 GO:0005515
Glsi06g0566 666 Pfam Response regulator receiver domain 50 161 IPR001789 GO:0000160
Glsi06g0566 666 MobiDBLite consensus disorder prediction 177 272 - -
Glsi06g0566 666 MobiDBLite consensus disorder prediction 177 226 - -
Glsi06g0566 666 MobiDBLite consensus disorder prediction 484 519 - -
Glsi06g0566 666 MobiDBLite consensus disorder prediction 593 611 - -
Glsi06g0566 666 SMART REC_2 48 163 IPR001789 GO:0000160
Glsi06g0566 666 SUPERFAMILY CheY-like 48 175 IPR011006 -
Glsi06g0566 666 ProSiteProfiles CCT domain profile. 611 653 IPR010402 GO:0005515
Glsi06g0566 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 48 271 IPR045279 GO:0009736
Glsi06g0566 666 MobiDBLite consensus disorder prediction 496 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0566 Glsi-ChrGlsi06 5242039 5246375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0566 606 652 Response Regulator Gene Family AT5G24470 89.362 4.59e-20 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Glsi06g0566 Response_reg 1.8e-20 CL0304