Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0563 ATGGATGCCCGAGCTTCAAGTCAAGTTAGTAGCGGTTGCATTATGGAAGCACAAAGCTCTCAGCATGCACAAATTATTGACATTCGTGGAGACTATCCTGATGGAAGAAGGGATCTTAGAGGAAATAAGATTTGTGGGGAAGCACCATGTGGGTTTGCAGATGCTGGATCCATCTCCAAGGATTCCAAAGAGCGGTCAACTTCCATGCGAAAACTTCTGATGGCAGTGGTTCTTTGTGTTATTTTCATGAGCATTGAAGTAGTTGGTGGCATCAAAGCTAACAGTCTTTCAATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCCTTTGCCATCTCCTTATTCTCTTTATGGGCTGCTGGATGGGAAGCCACTCCTCGTCAGTCATATGGATTTTTTAGAATTGAGATTCTCGGGGCTTTGGTTTCTATCCAACTTATATGGTTGCTTGCAGGGATTCTGGTATTTGAAGCCATTCAAAGAATCATCAATGGTGCACATGAGGTTGATGGCTTTTTAATGTTCTTAGTTTCTGCATTCGGTCTAGTGGTTAACATTATCATGGCTCTTTTATTGGGTCACGATCATGGCCATGGACATCATGAACATGATCATGGTTTTGGCCATGGCCATGGAGTTGTCTCTGCCCATCATGATCATCATCATGAACAGAATCCAGAAGATGAGCACCATCATACTCACGAGGATCACACTCATGACCATGCTAATGAACCACTTCTTGGTGGATCAAAGGATGGACCTGAAAAGAAGCGATGGAACATAAATGTTCAGGGAGCTTATCTCCATGTACTTGGGGACTCTATCCAGAGTGTTGGGGTTATGATTGGGGGAGCAATCATATGGTACAAGCCTGAGTGGCAAATAGTTGATTTAATCTGCACTCTAATCTTTTCAGTAATTGTTCTGGGAACAACTATCAATATGCTGCGAAACATACTGGAAGTCCTGATGGAGAGCACACCTCGGGAGATAGACGTGACGAAACTCGAAAGAGGGCTGTTGGACATGGATGAAGTAGTGGCTGTTCATGAGTTGCATATATGGGCCATCACAGTGGGGAAGGTTTTGCTGGCTTGTCATGTTAAAATAAGGCCCGAAGCAAATGCAGACATGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTTTATAACATCAGTCATGTAACCATACAGATAGAGCGCTAG 1215 0.4346 MDARASSQVSSGCIMEAQSSQHAQIIDIRGDYPDGRRDLRGNKICGEAPCGFADAGSISKDSKERSTSMRKLLMAVVLCVIFMSIEVVGGIKANSLSILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVFEAIQRIINGAHEVDGFLMFLVSAFGLVVNIIMALLLGHDHGHGHHEHDHGFGHGHGVVSAHHDHHHEQNPEDEHHHTHEDHTHDHANEPLLGGSKDGPEKKRWNINVQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDVTKLERGLLDMDEVVAVHELHIWAITVGKVLLACHVKIRPEANADMVLDKVIDYIKRVYNISHVTIQIER 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0563 404 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 331 403 IPR036837 -
Glsi06g0563 404 Gene3D Cation efflux protein transmembrane domain 68 325 IPR027469 -
Glsi06g0563 404 Pfam Cation efflux family 72 326 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi06g0563 404 MobiDBLite consensus disorder prediction 203 255 - -
Glsi06g0563 404 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 19 404 - -
Glsi06g0563 404 SUPERFAMILY Cation efflux protein transmembrane domain-like 66 327 IPR027469 -
Glsi06g0563 404 NCBIfam cation diffusion facilitator family transporter 69 404 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0563 Glsi-ChrGlsi06 5220129 5224549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0563 15 404 Inorganic Solute Cotransporters AT2G46800 70.720 0.0 521