Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0556 ATGGACGCATATTCCTCTGGAGAAGAAGTGGTTGTTAAGACTAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATAGGTTCCTTGAAGCTTTAAAGCTCTATGGGAGAGCATGGCAGCGCATAGAAGAGCATATCGGAACGAAGACTGCTGTGCAAATCAGGAGCCATGCCCAGAAGTTCTTTTCAAAGTTGGAGAAAGAGGCTCTTGTAAAAGGTGTTCCAATTGGACAAGCTCTTGACATAGAGATACCTCCTCCACGGCCCAAAAGAAAACCAAACAATCCTTATCCTCGGAAGACCACTGTTTGTGCCCCAACATCGCATGGTGGAGCAAAGGATGGAAAACTTGTCGTATCAGTTTCATCATCACATGGTAAACAAGCGCTGGACTTAGAGAAAGAACCGCTTCCAGAGAAATCTAATGGTGATGAAAGGCCAACAACTGTAAAAGAAAATAAAGATGAGAATTGCTCAGAAGTTTTTACCATTCTCCAGGATGCACCCTTTTCCTTTGTTTCCTCAGTAGACAAGAATTCAATGTCAACGTCAGTGCCACTGAGAAACTCATGCACCTTAAGGGAGTTCATACCTTCAGTGAAAGAAGTGATAACCCAGGATGACACGGATGAATCTTTTGTCACTATTGAACTTAAAGAATATCAGAAATTGGAGATACGTGATGATGGCAAACACACAGAACAGAGTAATGGCATAAGTAAAGCCTCTAAGATGGAGAATTCTGATGCTTCACATACAAAAGTGGTTCAGTCTAAGAAAACAGATGATCTCAATTGTGCAGTAGCAATAGATGGGATGCAAGGCAATCAGAACTACCCAAGACATGTCCCTGTGCACGTTCTTGATGGGAAACTTGAAACAGGTTCTCAGAATCCATCCCAAGATATGTCGTTTCAAGACTCCATATTTCCACAGATGGGAGGGTTTAATGGGCAACCTCATATGTTCACAAATTCAGATGCATCAAATGCAAGTGAAAGTCAAAATAACACAGCACGATCTTCTATTCATCAATCATTTCCTGCTTATCCTCCATTCACACAAATTCACCATAATCAAGATGATTACCAGTCATTTCTTCACATGTCCTCCACATTTTCAAGTCTTGTTGTCTCTACACTGCTTCAAAATCCTGCAGCACATGCTACAGCTAGTTTTGCTGCTTCATTTTGGCCCTATGCAAATATTGACACTTCTGCAGATTCTCCTGCATGCTCGCAAGGAGGGTTTCCATCTAGACAAATTGGCTCTCCTCCAAGTATGGCAGCTATTGCAGCTGCTACTGTGGCTGCTGCTAGTGCATGGTGGGCAGCCCATGGACTGCTTCCTTTGTGTGCTCCATTCCATACTGCTTTTTCGTGTCCTCCTGCATCAGCTGCAGCAGTTCCATCAATGGATACTGGGGAAATATCAGCAGCCAAAACAGAGCAAGGAGAAGCTACTCTTCAAAATCCTCCACAGGATCAGATATTAGATCCAGAATACTCGGAAGCTCCACAAGCTCAACATTCAGCTTCTAAGGCACCGGCTGTTTCTGCATCAGAGTCTGAGGAGAGTGGAGATGCCAAGTTAAATACTTCATTGAAGGCTGCTGATCATGAGAAGAACAAAGCAAATTCTGAGCACCCTGATTCTGACAAAACAAAAGGCAGAAAACAGGTTGACCGTTCCTCGTGTGGTTCCAATACAGCCTCTAGCAGCGAAGTAGAGACAGATGCATTAGAGAAGGATGATAAAGGGAAAGAGGAGCCTAAAGAACCTGATGCAAATAATTTAGCTACTGAGTCTAGTAATCGTCGTACTAGAAGTATTGGCAACCTTACTGATTCTTGGAAGGAGGTCTCGGAAGAGGGGCGGCTGGCCTTTCAGGCTCTTTTTACCAGAGAGGTGTTGCCACAAAGCTTTTCTCCTCCATATGACTTGACAAATCAGGATCATCAGAAGGACAACATTGAGGATAACAAGCAAAATACAGATGATAAGGATGAGGACAGCAAGAAATGCAGTACTAATTGTAAAGTAGCCGAGAAAAACCTCCCATTAGTTGAAAACAATGAGGAAGAGGGACTGCTAACCATAGGGCTTGGACAAGGAAGGCTTAAGGCTAGTCGAACAGGGTTTAAACCTTACAAAAGATGTTCAGTGGAGGCTAAGGAAAACAGGGTTGGAGCACACAGCAACCAAGGTGAAGAGAAAGGTCCCAAGAGAATACGCTTGGAAGGTGAGGCTTCAACGTGA 2280 0.4346 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQALDIEIPPPRPKRKPNNPYPRKTTVCAPTSHGGAKDGKLVVSVSSSHGKQALDLEKEPLPEKSNGDERPTTVKENKDENCSEVFTILQDAPFSFVSSVDKNSMSTSVPLRNSCTLREFIPSVKEVITQDDTDESFVTIELKEYQKLEIRDDGKHTEQSNGISKASKMENSDASHTKVVQSKKTDDLNCAVAIDGMQGNQNYPRHVPVHVLDGKLETGSQNPSQDMSFQDSIFPQMGGFNGQPHMFTNSDASNASESQNNTARSSIHQSFPAYPPFTQIHHNQDDYQSFLHMSSTFSSLVVSTLLQNPAAHATASFAASFWPYANIDTSADSPACSQGGFPSRQIGSPPSMAAIAAATVAAASAWWAAHGLLPLCAPFHTAFSCPPASAAAVPSMDTGEISAAKTEQGEATLQNPPQDQILDPEYSEAPQAQHSASKAPAVSASESEESGDAKLNTSLKAADHEKNKANSEHPDSDKTKGRKQVDRSSCGSNTASSSEVETDALEKDDKGKEEPKEPDANNLATESSNRRTRSIGNLTDSWKEVSEEGRLAFQALFTREVLPQSFSPPYDLTNQDHQKDNIEDNKQNTDDKDEDSKKCSTNCKVAEKNLPLVENNEEEGLLTIGLGQGRLKASRTGFKPYKRCSVEAKENRVGAHSNQGEEKGPKRIRLEGEAST 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0556 759 MobiDBLite consensus disorder prediction 135 162 - -
Glsi06g0556 759 SMART sant 23 71 IPR001005 -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 584 603 - -
Glsi06g0556 759 Gene3D - 26 73 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 235 265 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 88 122 - -
Glsi06g0556 759 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 482 626 - -
Glsi06g0556 759 PANTHER SWI/SNF COMPLEX-RELATED 7 643 - -
Glsi06g0556 759 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 569 583 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 134 162 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 541 568 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 513 537 - -
Glsi06g0556 759 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Glsi06g0556 759 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Glsi06g0556 759 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Glsi06g0556 759 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 732 759 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 484 504 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 659 681 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 604 624 - -
Glsi06g0556 759 CDD SANT 26 69 IPR001005 -
Glsi06g0556 759 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 243 259 - -
Glsi06g0556 759 MobiDBLite consensus disorder prediction 648 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0556 Glsi-ChrGlsi06 5164379 5171913 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi06g0556 Myb_DNA-binding 2.7e-13 CL0123