Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0526 ATGTGGTATAGATCAGCGTCTTTCATCCTCGACAACAGGCAGCAAAACGACGCCGCTTTGAAACCCGACACAATTTCTATCTCTCCTCCTCCGGGTACTCCCCCGTCTTCAATGGCCGATACCCTTGAGAACCCTAGTCCTAACCCTAAGATTTCCGCTTACTATCAGACCAGGGCGGCGCACCATGGCGTTGTCACCAGCGACTGGCTCGCTCAGGCTCAGGCTGCTGTTGACCCGAACCCAGATGACAATGGGATTTCGAGAAGTGATGTCAGGGTGTCGGATCCTGATAAGCCCTTCAGCGTGATTGATGAGTTCAATAACTGGCGAAAACAACCCGATTTGGCTGAGGCGGTGGCGGCGATTCGCGCCTTGGCGACGGTGATTAGGTCCAGTAAGGCTACGACTATGATGGAGCTGGAAATTGAGCTCAAGAAGGCTTCGGATTCTCTCAAATCTTGGGATACAACCTCCATCTCTTTGACAGCAGGCTGTGATCTGTTTATGCGATATGTAACCAGGACTTCTGCTTTAGAATATGAAGACTTCAATTCTGCAAAGTCTCGCTTAATTGAACGTGCCGAAAAGTTTGGGGAAATCTCATACAAGGCTCGCAAAGTTATTGCAATGCTGGGTCAAGATTTTATATTTGATGGTTGTACAATTCTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAGTTTTGAAACTGGCAGCACAGAATAAGAAATTGTTTCGAGTCTTCTGCACAGAGGGAAGACCAGACCGAACAGGTTTACGATTGTCTAATGAGCTGGCCAAACTTGATGTTCCTGTGAAACTCCTTATAGATTCTGCTGTGGCTTATACCATGGATGAGGTGGACATGGTATTTGTGGGGGCAGATGGAGTGGTTGAAAGTGGGGGTATAATTAACATGATGGGGACATACCAAATTGCATTGGTCGCACACAGTATGAATAAACCAGTTTACGTGGCTGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCTTTGGACCAAAAGGATTTGGCTCCTGCCTTACGCCCAATTGATTTTGGGGTACCCATTCCATCCAAGGTTGAGGTTGAGAAGTCTGCCCGGGATTATACTCCTCCTCAGTATCTGACTCTGCTTTTTACAGATTTAGGTGTCCTTACTCCATCCGTTGTTAGTGATGAGCTCATCCAGCTATACTTGTAG 1200 0.4692 MWYRSASFILDNRQQNDAALKPDTISISPPPGTPPSSMADTLENPSPNPKISAYYQTRAAHHGVVTSDWLAQAQAAVDPNPDDNGISRSDVRVSDPDKPFSVIDEFNNWRKQPDLAEAVAAIRALATVIRSSKATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKVIAMLGQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0526 399 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 61 399 - -
Glsi06g0526 399 FunFam Translation initiation factor eIF-2B subunit alpha 203 399 - -
Glsi06g0526 399 Coils Coil 137 157 - -
Glsi06g0526 399 Gene3D - 99 200 IPR042528 -
Glsi06g0526 399 FunFam Translation initiation factor eIF-2B subunit alpha 98 200 - -
Glsi06g0526 399 Gene3D - 202 399 IPR042529 -
Glsi06g0526 399 SUPERFAMILY NagB/RpiA/CoA transferase-like 115 398 IPR037171 -
Glsi06g0526 399 MobiDBLite consensus disorder prediction 19 48 - -
Glsi06g0526 399 Pfam Initiation factor 2 subunit family 113 387 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0526 Glsi-ChrGlsi06 4888942 4892262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0526 1 399 Eukaryotic Initiation Factors Gene Family AT1G53880 80.952 0.0 625