Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0518 ATGGCTAGTTCAAGGGTCTCTGAGTATGCTAAGTTGCCACTAATTCTACCATATATGCATCCTGATTCTGAACAGTACCATATCTACGGGGTAAATTTTGCATCAGCCGGTTCTGGTGCTCTGGTTGAAACTGCTCAAGGAGAAGTTAAAGTCCTTAAAACACAGGTGAGTTATTACAAGAATGTAAGGAATTTATTGAGGAAGAAACTAGGGAATGCAGAAGCCAAGACATTGCTGTCCAAAGCTGTCCACTTAATTTCCGTTGGAGCCAATGACTACGGAGCCCGTTTCTTCCCAAATCCCAGTCCTGTATTCCTTGGTTACTCTCAACAAGAATATGTAGATTTTGTGATTGGCAATCTTACGACTGCGATCAAAGAAATTCATAACCTAGGTGGAAGGAAATTTGGGTTTGTAAATTTGGGTTATGTCGGTTGTTCTCCAGTCATAAAAATACTTGTAAATGGAAGCAAAGGTGCGTGCCTAGAAGAATTCTTAGCAGTTGCGAGACTACACAATAATGAACTTCCAAAAATGCTTCTCAAGCTACAGAAACAGCTCAAGGGATTCAAATATTCAGTCTTTGATTTCTACAATGCACATGCTCAAGTCATAAAACACCCTTCAAAATATGGTTTTAAAGAAAGCCAAGTGGCATGTTGTGGAGAAGAAGCTGCTTCAGCTGCTAAGCGTGTCCACTTTGAAACTCGAGAAAAACCAGATCTGGTGATCAAGTTCTTGGAGAATCAGGGATTCTCACGAACCCAGATTGTTTCGTTCGTAAAAAGCGCACCACATTTACTCCGATATGATCTTGATAAAACTTTTCTTCCTAAGATTGAGCTTTTCAAATCCAGAGCTGTTTTGAGTTCAGACATCCCTAGGCTTATATCTGGTTGCCCATCCATTCTGTCTAGAAGCTTAACAAACCAACTTATTCCTTCCTTTGATTTCTTTCGAAATTTGTTTCAATCTGATGACAAAGAGCAGTTCTTGCAATGTTGA 1005 0.398 MASSRVSEYAKLPLILPYMHPDSEQYHIYGVNFASAGSGALVETAQGEVKVLKTQVSYYKNVRNLLRKKLGNAEAKTLLSKAVHLISVGANDYGARFFPNPSPVFLGYSQQEYVDFVIGNLTTAIKEIHNLGGRKFGFVNLGYVGCSPVIKILVNGSKGACLEEFLAVARLHNNELPKMLLKLQKQLKGFKYSVFDFYNAHAQVIKHPSKYGFKESQVACCGEEAASAAKRVHFETREKPDLVIKFLENQGFSRTQIVSFVKSAPHLLRYDLDKTFLPKIELFKSRAVLSSDIPRLISGCPSILSRSLTNQLIPSFDFFRNLFQSDDKEQFLQC 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0518 334 Gene3D SGNH hydrolase 2 239 IPR036514 -
Glsi06g0518 334 Pfam mTERF 244 329 IPR003690 GO:0003690|GO:0006355
Glsi06g0518 334 Pfam GDSL-like Lipase/Acylhydrolase 24 222 IPR001087 GO:0016788
Glsi06g0518 334 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 225 IPR044552 -
Glsi06g0518 334 SMART mt_12 294 326 IPR003690 GO:0003690|GO:0006355
Glsi06g0518 334 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0518 Glsi-ChrGlsi06 4814875 4820601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0518 30 221 Pollen Coat Proteome AT1G75910 31.818 4.75e-21 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi06g0518 Lipase_GDSL 7.1e-11 CL0264