Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0503 ATGACTGGAACAATGGCTAATGGAGAAGAGAAAGGCAGTGACTTCTATGCGGTTCTGGGGTTGAATAAGGAGTGCACGGAATCGGATCTCAGAAATGCCTATAAGAAACTTGCAATGAAATGGCACCCAGATCGTTGTTCAGCGTCAGGAAATTCAAAGTTCGTGGAAGAATCTAAGAAGAAATTCCAGACAATTCAGCAAGCCTATTCTGTTTTATCTGACGCGAACAAAAGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGACGACGAAAATGACATGGGTGATTTCCTGAACGAAATGGCAGTAATGATGAGCCAAACAAAACCAAATGAGAATGGGGAGGAAAGCTTTGAGGAGTTGCAACAGCTGTTTGAAGAAATGTTTCAAGGGGACATTGGGTCATCTGGAGGTGCCTCCCACACTGCTGCTGCTGCTGCTTGTTCTACTTCATCTACCTATATGACTTACTGTGAAAGTTCTGGTTCGAATAAACGCAATTCCTCCGAGATGAATATTGGGAAGGCAGGGGATTCTTGTGAGTTTGATGCCAGTTTCCAGAATTTCTGTTTAGGGGCGGAGCAGCTTCAAGACATGAAGAAGGGGGGAAGAGTAGGAGGAGGAATTGCTGGAGGAAGACGTAGCAGTAGGCGTAGGCATGGTAGGAAGCAAAAGGTTTCATCCGGCCACGATGTTTCCTCCAATGACTATTCCAGTATTTCTGCTCAGTGA 735 0.4503 MTGTMANGEEKGSDFYAVLGLNKECTESDLRNAYKKLAMKWHPDRCSASGNSKFVEESKKKFQTIQQAYSVLSDANKRFLYDIGVYDSDDDENDMGDFLNEMAVMMSQTKPNENGEESFEELQQLFEEMFQGDIGSSGGASHTAAAAACSTSSTYMTYCESSGSNKRNSSEMNIGKAGDSCEFDASFQNFCLGAEQLQDMKKGGRVGGGIAGGRRSSRRRHGRKQKVSSGHDVSSNDYSSISAQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0503 244 CDD DnaJ 14 74 IPR001623 -
Glsi06g0503 244 PRINTS DnaJ domain signature 57 77 IPR001623 -
Glsi06g0503 244 PRINTS DnaJ domain signature 16 34 IPR001623 -
Glsi06g0503 244 PRINTS DnaJ domain signature 34 49 IPR001623 -
Glsi06g0503 244 SUPERFAMILY Chaperone J-domain 11 84 IPR036869 -
Glsi06g0503 244 MobiDBLite consensus disorder prediction 202 244 - -
Glsi06g0503 244 PANTHER PUTATIVE, EXPRESSED-RELATED 6 186 - -
Glsi06g0503 244 MobiDBLite consensus disorder prediction 229 244 - -
Glsi06g0503 244 Pfam DnaJ domain 14 82 IPR001623 -
Glsi06g0503 244 SMART dnaj_3 13 77 IPR001623 -
Glsi06g0503 244 Gene3D DnaJ domain 11 142 IPR036869 -
Glsi06g0503 244 ProSiteProfiles dnaJ domain profile. 14 85 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0503 Glsi-ChrGlsi06 4507709 4515880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0503 16 82 C2H2 Transcription Factor Family AT1G74250 41.176 1.02e-09 56.6