Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0500 ATGATGGACGACGATGACGAGATCCAGTCACAACCGTCTCCGGAGACTGGATCTCCGGCGTCACCGAGGTCGAACGGTCGGATTACGGTGACTGTCGCGGCGCCGGCGACACAGCTGCCACCTCAGAATAACTTGACATTAGCGCTTCCAGCGCAGCAGCAGAAGGGAAACGGCGGTGGGGGTGGGAGGGAGGATTGCTGGAGTGAAGGTGCGACGGCGGTTTTGATCGACGCGTGGGGGGAGAGGTACTTGGAGCTGAGCAGGGGGAATCTCAAGCAGAAGCACTGGAAGGAGGTGGCGGATATTGTGAGTAGCCGGGAGGACTATACGAAAACGGCCAAGACTGATATTCAGTGCAAGAATCGGATCGACACGGTGAAGAAGAAGTACAAATCGGAGAAGGCGAAGATTGCAGAAGGTAGCGGGCCCAGTAAATGGAAATTCTTTGAGAGATTGGACTTTTTGATTGGTCCAACTGCGAAAATTGCAGGTTCTAGCGGTGGTGCCGGAGCGAGTACTGTGAGTAGTTTGCAAACCCAGAAAGTGCCTTTGGGAATTCCAGTGGGACTGCGGTCTGTGAATCAGTATCAATCTCATCAACGGCAGAAGCAGCAACCCCAGTTGAAGACCCAGAAGATACAGTTCCGTCGGCGGGCTCCGGTCGATTCGGATTCGTCACCATCGGAGAGAGAACCGTCGCCACTTTCCAGTGATAGTTTTCTGCCGGAAAGATTTGAAAGGAAGAAGCCCAGGATGCAGAGGGAGATCAATTCTGGTGCAGGAGCTGTGAAAGGGAAAGAAGGGGGGAAGGATAAGAGTTGGGGAAGTGCAGTGAGGGAATTGACACAAGCTATACTGAAGTTCGGTGAAGCTTATGAGCAAGCTGAAAGCTCAAAGTTGCAGCAGGTCGTGGAAATGGAGAAGCGGCGAATGAAGTTTTCTAAGGACCTGGAATTGCAGAGAATGCAGTTTTTCATGAAGACCCAGTTGGAGATTTCGCAGCTGAATTATGGTAGAAGAGGTGGAAATGCAAGCAATCATCATAGCAACAACAATAACAATAATAGTGACAGTGATAACTAG 1083 0.5115 MMDDDDEIQSQPSPETGSPASPRSNGRITVTVAAPATQLPPQNNLTLALPAQQQKGNGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSSREDYTKTAKTDIQCKNRIDTVKKKYKSEKAKIAEGSGPSKWKFFERLDFLIGPTAKIAGSSGGAGASTVSSLQTQKVPLGIPVGLRSVNQYQSHQRQKQQPQLKTQKIQFRRRAPVDSDSSPSEREPSPLSSDSFLPERFERKKPRMQREINSGAGAVKGKEGGKDKSWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKRRMKFSKDLELQRMQFFMKTQLEISQLNYGRRGGNASNHHSNNNNNNSDSDN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0500 360 Gene3D - 67 132 - -
Glsi06g0500 360 MobiDBLite consensus disorder prediction 11 53 - -
Glsi06g0500 360 MobiDBLite consensus disorder prediction 336 360 - -
Glsi06g0500 360 Pfam Myb/SANT-like DNA-binding domain 64 154 IPR044822 -
Glsi06g0500 360 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 35 337 IPR044823 -
Glsi06g0500 360 MobiDBLite consensus disorder prediction 193 276 - -
Glsi06g0500 360 MobiDBLite consensus disorder prediction 193 212 - -
Glsi06g0500 360 FunFam trihelix transcription factor ASIL2 67 132 - -
Glsi06g0500 360 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0500 Glsi-ChrGlsi06 4492536 4493618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0500 2 351 Trihelix Transcription Factor Family AT3G14180 46.697 5.96e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi06g0500 Myb_DNA-bind_4 1.8e-25 CL0123