Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0487 ATGGCCGCCGTAGTATCTCCGGCGACGACGTTCCTCCGGCCCACTCTCATCCTCATCATCACCATCGTCGTTCTTTTCCCTATTTCTTCATCTTCTTTGTCAGAAGCTGAAGCTCTGCTCAACCTCAAGAACTCATTAACCACTGGCAACGCTAATAATAAAGCTCTGACCAACTGGGTGGCTAACTCTCTCCCTTGTGACGAAGACGAACAATGGGATGGGGTTGTATGCAATGACGGGGCAGTCACGGGGATTCACCTTGCAGGAATGGGGTTATCAGGGAAGATAGACATCGATGCCTTGCTAGAAATCAAGGGTCTTCGAACTATAAGCTTTGAGAGAAACTCTTTCTCTGGTTCATTACCGGAGTTCAATCGAATAGGCTACTTGAGAGCCATTTCCTTATCAGAAAACCAGTTTTCAGGTGAGATTCCTTTGAATTACTTCCAGAACATGGGGTCCCTAAAGAAGCTCTGGCTTTCTTATAACAATTTTAGCGGTCAGATCCCATCTTCATTGGCTCAAGTTCCAACACTTACGGAGTTATATCTGGAAAACAATCAGTTTAGTGGGAAAATTCCAGATGTGGATAAACCAACGTTGGTGAAATTCAATGTGTCCAACAACAAACTGGAAGGTGAAATCCCAACTAGTTTATTAAAATTCGGCGAGAGCTCATTTTCTGGGAATTCTGGCCTTTGTGGGGAGAAATTAGGAAAAGTGTGTGAGAAGGTAGAAGTTGAGCAGCCAAAACAGATAGATACACAGAACAGTACGAGCTCGAATAATTCGAACAACGTTAATAATGGTAATAATGGGTCCGATTCACATAGTACTGATCAGCTTAGCTCAGTGAAGATTGCTGTGATTGTAGCATCAAGTTTAGCAATTTTCTCACTTCTTGTTTTGGTTGTTGTGAGAACAAGGCGAAAGAAAGAGAATATTGATACGCTTGGAAAAGAACATAAAGAGCAGACGGTTCAAGTTAAGGTAGCTCCAGCACCTGTTAAGAAAGCAAGCAGCAAGAGGGGGTCCACCCTAGGGAAGGGCGGCGGGGGGCTTGGATATCTTGTTATGATGAATAAAGAGAAGGTTTGTTTTGGGTTGCCGGATTTGATGAAGGCATCTGCGGAAGTGCTGGGAAATGGAGGGGTGGGATCTTCTTACAAAGCTGTGCTGGCGAATGGGGTGGCAGTGGTGGTGAAGAGGATGAGAGAGATGAATGCCAAGGGAAAAGATGGGTTTGATGCACAGATGAGGAATCTAGGAAAGCTGAAACACTGGAATATATTGACCCCTTTGGCTTATCATTATAGAAAGGATGAGAAATTGGTGGTCTTCGAATACGTTCCCAAAGGCAGTCTACTCTATTTGTTGCATGGTGATCGAGGACCATCGCATGCTGAATTGGATTGGCCAGCCCGTTTAAAGATTGTGAAGGGAATAGCCGAAGGTATGCGTTATCTTCATACAGAACTTGCTCCCTCTAATTTACCCCATGGCAATCTCAAATCCAGCAATATTCTTCTTGGTCCAAATTATGAGCCACTGCTAGTAGATTATGGATATAACTCGTTGGTTAGCGCCGGCAACGTAACACAAGCTCTATTTGCTTACAAGGCTCCTGAAGCAGCACAAGGTGGCCTAGTCTCTCCCAAGTGTGACGTTTACTGTCTAGGAATCGTCATTCTCGAACTTCTAACTGGGAAATTTCCTTCCCAATATCTCAACAATGGGAAGGGTGGGTTTGACGTCGTGCAATGGATTGGGTCAGCAATTTCTGAGAGAAGAGAATCAGAACTGCTTGATCCTAAAATTGCAAGCTCTAAGAATTCACTAGGAGACATGGTGAGGCTCCTTAATATTGGTGCTACTTGCACTGAAAGTAACCCAGAACTAAGATTAGACATGATGGAGGCCATTAGAAGGATAGAGGAGAATCATTTTGAATAAATGGATAAATCTTGGATCAATAAACCTCGACATTCAATAGAGTACCTAAATGGTTTAGACGGATTTTTGGAATTCGCAAATGCTAACTCTGGGGTCGAAGGTAGAATAATATGCCCATACCCAAAGTGTAGATTCAAAAAATGGCAACTCATCGAGGTCGTGCGCCAACATTTGATCGTCAAACCATTTCCGGAGGGATACACTTTTTGGAGTTTGCACGGAGAAATGATTACAGAAGAACCTGCTGTAGGACATGCTATAATGCCAATTGAGGTCTCAGAACCCATAGTTCGAGATGACCATGTCCAGAACATAGTCCGTGATGCATTCGGGATTCACCCCGAAAATGAGAGCATCGCTTCTGTGGATATGCCAGATCCGCAGTCAGCAGAAAGGATGGATGATAGTGTCAAATATTTTTATGAGTTACTGAAAGATGGTGAACAACCGCTCTATGAAGGGTGTGAAAAGTATTCAAAACTGTCTTTCTTGGTGAAGTTGTATCACATCAAGTGTTTGTGCGGCCTAAGCGACAAAGCAATGTCGATGGTACTTGAGTTGCTTGTCGATGTATTCCCAGATGCCAAGATTCCGCCTTCATTTTACGAGGCTAAAAAAATCATTAATAAGTTGGGGTTGAACTACAAAAAAATTCACGCATGTCAGAATGATTGTATGTTATACTGGGGTGAGCATGAAAGTAGAGAAACTTGTTGTAAGTGCTCAGCACCAAGGTGGAAACCGAAACAAAAGGGGGAGAAGCGAAAAAAGGTGCCTAATAAAATTCTTAGATACTTTCCAGTTAAGCCAAGATTGCAGAGGTTGTTCATGTCTTCTAAAACTGCTGAATTTATGAGATGGCATTCTGAAGCCAAAATTTCTGACGGCATCATGAGGCATCCAAAGGATTCTGAGGCATGGAAGAGATTTGATCTTCTGAATCCTCAATTTGCATCAGATCCGAGAAATGTTCGTTTGGGCCTTGCAACAGATGGTTTCAATCCATTTGGAAACCTATCTACAAGTTACAGTATATGGCCAGTTCTGCTGATTCCGTACAATCTTCCTCCTTGGATGTCTATGAAACAGAGTTCATTCATGTTGTCAATGATAATTCTAGGGAAAAAAGCACCGGGGAATGATATAGATGTGTTTTTACAGCCACTAATTGAAGAGCTGAAGGAGTTGTGGGTTGAAGGTGTTAAGACGTACGATGCATTTGGTAAAGAAATGTTCAATATGCATGCAGCTCTTTTGTGGACAATCAGTGATTTTCCTGGCCTTGGATGTTTATCAGGCTGGAATACTCATACTGGATTAGCCTGTCCGTACTGTAACTTTGACTCTACTCCAGTCCGTCTCCCTCACAGTCGGAAGTGGTGTTTTACGGGACATCGCCGCTTCTTATCTCCGGGTCACAAATTCAGGCTGGCCCGCAATAGGTTTGACGGAAAAGAGGAAAGAAGAAACCCTCCTCCGCAACTGAGTGGTGTAGACATTTTCCGACAAGTCAATGATATTGAAGTTGTCTTTGGAAAAAATGTGGAAACTGATGTTGGGACTCAACAACGGCGTTCTCGAAGTCAGGGTTCGGTTGATGCTGGAACTCAACAATGGCGTAAGAAAAGTATATTTTTCAAACTTCCGTATTGGATAAATAATATGTTGCGTCATAATCTTGACGTAATGCATATTGAGAAAAATGTCTGCGATAACATCATTTACACTTTACTTAATGATTCCGGCCGTTCAAAGGATCACATAAACGCGCGGAAAGACTTAAAGGAGTTTGGTGTGAGGCCTGAGTTGTGGCCTGATGATGGCGGTAAATATCCACCTGCTTTGTTCACGTTGACAAATGCAGGCAAGGAAGTATTTCTGAAAACACTTAAGAATGTATCTGTGCCTGACGGTTATTGCAGTAATATCTCCAGATGTATTGATGTAAGACAACGTAAAATCGGAGGACTAAAAAGTCACGACTGTCATATCCTTATGGAACAAGTGTTACCATTAGCCATAAGAAAGACACTGCCGAAGCCGGTATCTGCAGTTCTGATCGAGTTTTGTTCATTCTTCCGGCAACTGTGCTCCAGATTTTTGAATGTTAATGAACTTGATCAACTTCAAAATCGAATCATTATGACGCTGTGCCATCTTGAAATGTTATTTCCGCCGTCTTTCTTTACAGTCATGGTGCACTTGACTGTACATTTGGTCATGGAAGCGAAGTTAGGAGGACCAGTCCAATATCGTTGGATGTATCCCGTCGAAAGATACATAGATGGTGTTGACACTGTCTTCAATCGTCCTCCTCGTGTGGATGATCGACCCGATGTTGAGACGTCTGACAGGAGTTTGTTCCCACCAATAGGAAGACCAGTTGGTGGATTTGATTATTTCACCATTTCTCCCCGGGAAAAATTGCAGGCTCATCGGCATGTCTTAACAAACTGCAAAGAAGTTGATCCTTACTTACAGGAATTTAGAGACTATGTACGGCATAGTTTAAGAAGTCGTACGCGATCATCTACCGAGATAGACAAAAAAGTCCACAGAGAATTTGCCTCTTGGTTTTTGCGTCGTATCGCAAATGATGCTGATGGATCGCAGTGTGCTGATTTAAAATATCTCGCACTTGGTCCACTAGATAGAGCACGTCGATACAGTGCTTACAATGTCAATGGATTCAAATTTCGAACTTTAGAGCGAGACCAAGGGATGACATATCAAAATAGTGGAGTTTACGGTACTTTCGGGACGAGGAGTTATGCAAGTACTAGTTATACGAATATGCAATTTGGTGGCGTCCCGTATTATGGAAAACTGTTGGACATTGTCGAGTTAAACTACCATGGCCATTTTACAGTCGTATTATTTAAGTGTATGTGGGCCAACACAACTACAACGAGAGGAATTGCAATTGATGACTTCGGGGTGACATCGGTTGATTTTTCTCGGTTGATTCACACTGGTGAAAATGATGATGACGAACCATACATCCAGGCATCTGAGGCTCATCAAGTATACTATGTACAAGATGAGTTGGACAAGAACTGGAGTATAGTGATGCATTTAAAACCCCGTGACTTATACGAGATGGGTGATGAAGATGAAAATTTTATATACGAGAGCGATCCGTTACACACGCAAAATTTAGAAAGATTGTTTCCAGAAGAAGAAGTTAATTTATGCTTGTTACGGTATTAG 5163 0.4242 MAAVVSPATTFLRPTLILIITIVVLFPISSSSLSEAEALLNLKNSLTTGNANNKALTNWVANSLPCDEDEQWDGVVCNDGAVTGIHLAGMGLSGKIDIDALLEIKGLRTISFERNSFSGSLPEFNRIGYLRAISLSENQFSGEIPLNYFQNMGSLKKLWLSYNNFSGQIPSSLAQVPTLTELYLENNQFSGKIPDVDKPTLVKFNVSNNKLEGEIPTSLLKFGESSFSGNSGLCGEKLGKVCEKVEVEQPKQIDTQNSTSSNNSNNVNNGNNGSDSHSTDQLSSVKIAVIVASSLAIFSLLVLVVVRTRRKKENIDTLGKEHKEQTVQVKVAPAPVKKASSKRGSTLGKGGGGLGYLVMMNKEKVCFGLPDLMKASAEVLGNGGVGSSYKAVLANGVAVVVKRMREMNAKGKDGFDAQMRNLGKLKHWNILTPLAYHYRKDEKLVVFEYVPKGSLLYLLHGDRGPSHAELDWPARLKIVKGIAEGMRYLHTELAPSNLPHGNLKSSNILLGPNYEPLLVDYGYNSLVSAGNVTQALFAYKAPEAAQGGLVSPKCDVYCLGIVILELLTGKFPSQYLNNGKGGFDVVQWIGSAISERRESELLDPKIASSKNSLGDMVRLLNIGATCTESNPELRLDMMEAIRRIEENHFEXMDKSWINKPRHSIEYLNGLDGFLEFANANSGVEGRIICPYPKCRFKKWQLIEVVRQHLIVKPFPEGYTFWSLHGEMITEEPAVGHAIMPIEVSEPIVRDDHVQNIVRDAFGIHPENESIASVDMPDPQSAERMDDSVKYFYELLKDGEQPLYEGCEKYSKLSFLVKLYHIKCLCGLSDKAMSMVLELLVDVFPDAKIPPSFYEAKKIINKLGLNYKKIHACQNDCMLYWGEHESRETCCKCSAPRWKPKQKGEKRKKVPNKILRYFPVKPRLQRLFMSSKTAEFMRWHSEAKISDGIMRHPKDSEAWKRFDLLNPQFASDPRNVRLGLATDGFNPFGNLSTSYSIWPVLLIPYNLPPWMSMKQSSFMLSMIILGKKAPGNDIDVFLQPLIEELKELWVEGVKTYDAFGKEMFNMHAALLWTISDFPGLGCLSGWNTHTGLACPYCNFDSTPVRLPHSRKWCFTGHRRFLSPGHKFRLARNRFDGKEERRNPPPQLSGVDIFRQVNDIEVVFGKNVETDVGTQQRRSRSQGSVDAGTQQWRKKSIFFKLPYWINNMLRHNLDVMHIEKNVCDNIIYTLLNDSGRSKDHINARKDLKEFGVRPELWPDDGGKYPPALFTLTNAGKEVFLKTLKNVSVPDGYCSNISRCIDVRQRKIGGLKSHDCHILMEQVLPLAIRKTLPKPVSAVLIEFCSFFRQLCSRFLNVNELDQLQNRIIMTLCHLEMLFPPSFFTVMVHLTVHLVMEAKLGGPVQYRWMYPVERYIDGVDTVFNRPPRVDDRPDVETSDRSLFPPIGRPVGGFDYFTISPREKLQAHRHVLTNCKEVDPYLQEFRDYVRHSLRSRTRSSTEIDKKVHREFASWFLRRIANDADGSQCADLKYLALGPLDRARRYSAYNVNGFKFRTLERDQGMTYQNSGVYGTFGTRSYASTSYTNMQFGGVPYYGKLLDIVELNYHGHFTVVLFKCMWANTTTTRGIAIDDFGVTSVDFSRLIHTGENDDDEPYIQASEAHQVYYVQDELDKNWSIVMHLKPRDLYEMGDEDENFIYESDPLHTQNLERLFPEEEVNLCLLRY 1720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0487 1720 PANTHER DUF4218 DOMAIN-CONTAINING PROTEIN-RELATED 1080 1412 - -
Glsi06g0487 1720 MobiDBLite consensus disorder prediction 251 278 - -
Glsi06g0487 1720 Gene3D Ribonuclease Inhibitor 201 238 IPR032675 -
Glsi06g0487 1720 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 98 193 - -
Glsi06g0487 1720 Gene3D Phosphorylase Kinase; domain 1 373 449 - -
Glsi06g0487 1720 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515
Glsi06g0487 1720 Pfam Domain of unknown function (DUF4216) 1599 1674 IPR025312 -
Glsi06g0487 1720 Gene3D Transferase(Phosphotransferase) domain 1 450 659 - -
Glsi06g0487 1720 Pfam Domain of unknown function (DUF4218) 1347 1413 IPR025452 -
Glsi06g0487 1720 ProSiteProfiles Protein kinase domain profile. 374 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0487 1720 Gene3D Ribonuclease Inhibitor 32 198 IPR032675 -
Glsi06g0487 1720 MobiDBLite consensus disorder prediction 249 278 - -
Glsi06g0487 1720 Pfam Transposase-associated domain 654 726 IPR029480 -
Glsi06g0487 1720 Pfam Transposase family tnp2 946 1158 IPR004242 -
Glsi06g0487 1720 SUPERFAMILY Protein kinase-like (PK-like) 378 644 IPR011009 -
Glsi06g0487 1720 Pfam Protein kinase domain 378 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g0487 1720 Pfam Leucine rich repeat N-terminal domain 34 78 IPR013210 -
Glsi06g0487 1720 SUPERFAMILY L domain-like 32 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0487 Glsi-ChrGlsi06 4383548 4392613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0487 16 645 Receptor kinase-like Gene Family AT3G42880 45.122 6.86e-175 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi06g0487 Pkinase 9.7e-26 CL0016