Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0473 ATGGCTGATCCTGTTCGTTCCATTTCCTTCTTCTTCCTCTTTCTTGCTTTTGCTTCTGTTTCTGTCTCCACCTCTTCAGACCCATCTGATTCTCCTCAAACCTTCATTATCCATGTGTCTAAATCAGCAAAGCCCAAGCTTTTCTCCTCCCACCATCATTGGTACTCCTCCATCATCAGGTCCCTCTCTCCTTCCCCTCACCCCACGAAAATCCTCTACACCTATGACGCCGCCGTTCATGGCTTCTCCGTCCGCCTCGCACCCTCTCAAGCCTCCGAGCTCCGCCATATCCCAGGTGTTCTCTCTGTTCTGCCAGATCAAATTCGCCATGTGCACACCACACGCACCCCTCGTTTCCTGGGCTTAGCTGATAGCTTCGGCTTGTGGCCAAACTCCGATTACGCTGATGATGTCGTGATCGGAGTTTTAGATACCGGGATTTGGCCGGAACGCCGGAGTTTCTCAGATTTTGGTCTCTCCCCTGTTCCGGCCAGCTGGAAGGGAGCTTGTGAAACAGCGCGTGAATTCCCTGCTTCAGCTTGTAACAGGAAAATTATTGGTGCCAGAACTTTCTACAAAGGATATGAAGCTTATCTGAAGAGGCCCATTGACGAATCTGTGGAATCTAAATCTCCAAGAGATACAGAAGGCCATGGAACCCATACTGCATCAACAGCTGCAGGATCTGTGGTTGCAAATGCTAGCTTGTTTCACTATGCTCAAGGTGAAGCTAGAGGAATGGCCACCAAAGCTCGGATTGCTGCGTATAAAATCTGTTGGAGACTGGGTTGTTTTGATTCTGATATTCTCGCTGCCATGGACCAAGCCATTGCTGATGGGGTCCATATTATCTCTCTGTCTGTTGGAGCCAATGGTTATGCGCCTCAATATGATCATGATTCGATAGCAATTGGAGCATTTGGTGCAGCCCAGCACGGTGTTCTTGTGTCTTGCTCAGCTGGGAATTCCGGTCCTCGTCCACAGACTGCTGTGAACATATCTCCGTGGATTTTGACTGTTGGCGCTTCAACTATTGACAGAGAATTTCCGGCAGATGTGGTGCTTGGCGATGGTAGAATTCTTGGCGGCGTGTCTCTGTACTATGGTGATGGATTACCAGATTTCAAGCTTCCATTGGTGTATGCTGCTGATTGTGGGAGCAGGTATTGCTACATGGGGTCTCTGAACTCATCTAAAGTCCAAGGAAAAATCGTTGTTTGTGATAGGGGAGGCAATGCCAGGGTTGAGAAAGGAAGTGCAGTGAAGCGTGCAGGTGGGTTAGGAATGATTTTAGCTAATACTGAAGATAGTGGTGAAGAACTTCTTGCAGATGCTCATCTTATAGCAGCAACTATGGTGGGTCAAATAGCTGGAGACAAGATCAAGGAGTATATAAGAGTGAATCAATATCCAACAGCAACCATAGAGTTCAGAGGGACTGTAATTGGGACTTCACCATCTGCTCCTAAAGTTGCAGCTTTTTCTAGCCGTGGTCCAAACCATCTCACATCTGAGATTCTTAAGCCAGATGTTATAGCTCCTGGTGTTAACATTTTGGCAGGGTGGACTGGGAAGGTAGGGCCTACGGATTTGGACCTTGATCCTAGAAGAGTTGAGTTTAACATAATATCAGGAACTTCAATGTCCTGTCCCCATGCTAGTGGAATAGCAGCTTTGCTTAGGAAGGCTTATCCTAAATGGTCACCTGCTGCAATAAAGTCTGCTCTAATGACGACGGCTTATAATGTGGATAATTCTGGGAAGAACATTGAGGATCTTGGAAGTGGGAAAGAATCAACCCCATTCATTTATGGTGCTGGACATGTTGATCCCAACAGGGCTCTTAATCCTGGGTTGGTTTATGACTTAGATAGCAATGATTATTTGGCATTCCTATGTTCAATTGGGTATGAAGCTAAGCAAATTTCGGTTTTCATTGGAGAGCCTGCTAGTTCGGGCATTTGTGGAAGTAAGCTAGCTAGGACTGGGAGATTAACTACTCCTGGTAATTTGAATTACCCATCTTTCTCTGTGGAATTTAGTGCAGACAAGGACTTGGTTAAGTATAAACGAGTTGTTACCAACGTTGGAAGCTCATCTGATGCTGTTTACAATGTCAAAGTGAACGCTCCACCTGGTGTTGAAGTCAGTGTGTCCCCCAGCAAGCTTGTGTTCAGTGCTGATAACCAGACACAAAGTTATGAGGTTACATTTGCCAAGGGAGCTGCTGGGTATGCTAGTTATGGGTCAATTGAGTGGAGTGATGATGGAGGTCACCATGTGAGGAGCCCAATTGCTGTCAGATGGAGTGGTGGGTTCTCGTCATCCATTTGA 2334 0.4662 MADPVRSISFFFLFLAFASVSVSTSSDPSDSPQTFIIHVSKSAKPKLFSSHHHWYSSIIRSLSPSPHPTKILYTYDAAVHGFSVRLAPSQASELRHIPGVLSVLPDQIRHVHTTRTPRFLGLADSFGLWPNSDYADDVVIGVLDTGIWPERRSFSDFGLSPVPASWKGACETAREFPASACNRKIIGARTFYKGYEAYLKRPIDESVESKSPRDTEGHGTHTASTAAGSVVANASLFHYAQGEARGMATKARIAAYKICWRLGCFDSDILAAMDQAIADGVHIISLSVGANGYAPQYDHDSIAIGAFGAAQHGVLVSCSAGNSGPRPQTAVNISPWILTVGASTIDREFPADVVLGDGRILGGVSLYYGDGLPDFKLPLVYAADCGSRYCYMGSLNSSKVQGKIVVCDRGGNARVEKGSAVKRAGGLGMILANTEDSGEELLADAHLIAATMVGQIAGDKIKEYIRVNQYPTATIEFRGTVIGTSPSAPKVAAFSSRGPNHLTSEILKPDVIAPGVNILAGWTGKVGPTDLDLDPRRVEFNIISGTSMSCPHASGIAALLRKAYPKWSPAAIKSALMTTAYNVDNSGKNIEDLGSGKESTPFIYGAGHVDPNRALNPGLVYDLDSNDYLAFLCSIGYEAKQISVFIGEPASSGICGSKLARTGRLTTPGNLNYPSFSVEFSADKDLVKYKRVVTNVGSSSDAVYNVKVNAPPGVEVSVSPSKLVFSADNQTQSYEVTFAKGAAGYASYGSIEWSDDGGHHVRSPIAVRWSGGFSSSI 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0473 777 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Glsi06g0473 777 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Glsi06g0473 777 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Glsi06g0473 777 SUPERFAMILY Subtilisin-like 111 619 IPR036852 GO:0004252|GO:0006508
Glsi06g0473 777 Pfam Subtilase family 136 591 IPR000209 GO:0006508|GO:0008236
Glsi06g0473 777 Pfam Peptidase inhibitor I9 34 112 IPR010259 -
Glsi06g0473 777 Gene3D - 632 769 - -
Glsi06g0473 777 SUPERFAMILY Protease propeptides/inhibitors 32 111 - -
Glsi06g0473 777 CDD PA_subtilisin_like 352 475 - -
Glsi06g0473 777 Gene3D Peptidase S8/S53 domain 137 628 IPR036852 GO:0004252|GO:0006508
Glsi06g0473 777 FunFam Subtilisin-like protease SBT1.5 137 357 - -
Glsi06g0473 777 CDD Peptidases_S8_3 110 581 IPR034197 -
Glsi06g0473 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Glsi06g0473 777 FunFam Subtilisin-like protease SBT1.9 23 112 - -
Glsi06g0473 777 Gene3D - 346 482 - -
Glsi06g0473 777 ProSiteProfiles Serine proteases, subtilase domain profile. 117 615 - -
Glsi06g0473 777 SUPERFAMILY PA domain 374 463 IPR046450 -
Glsi06g0473 777 Pfam PA domain 376 461 IPR003137 -
Glsi06g0473 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 112 IPR037045 -
Glsi06g0473 777 FunFam subtilisin-like protease SBT1.5 346 482 - -
Glsi06g0473 777 Pfam Fibronectin type-III domain 670 767 IPR041469 -
Glsi06g0473 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 63 767 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0473 Glsi-ChrGlsi06 4252460 4254793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0473 5 772 Subtilisin-like Serine Gene Family AT3G14067 64.607 0.0 1011