Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0471 ATGGCAATAGAATTGGCAGTTCCTAGTTGGGTTTCAACTACTTCAGCCGCATGGCTCGCAACCTTTGCCGTCCTCCTCCTCTTCGGCCGCCGTCTCCGTCGCCAGAGATATAACTTGCCCCCAGGACCAAAATCGTGGCCCATCATCGGCAACCTCAACCTCATAGGCTCACTTCCTCATCGTTCCATCCATGCTCTCTCACAGAAGTATGGGCCCATCATGCATATCTGGTTCGGCTCCAATCCAATCATCGTCGGCTCCTCCGTGGAAATGGCTAAGGCATTCCTTAAAACCCACGACGCCACCTTAGCCGGCAGACCAAAGTTTGCGGCCGGAAAGTACACAACCTACAATTACTCCGACATCACCTGGTCCCCTTACGGCCCATACTGGCGCCAAGCTCGAAAAATGTGCCTAATGGAGCTGTTCAGCGCCAAAAGGCTGGAGTCCTATGAGTATATCAGAAAGGAAGAGCTGAGAGCTATGCTGAAGGAGCTTTACGAGTCCGCAAACCAAACGGTGTCGTTGAAGGACCACCTTTCGACTCTGAGCCTGAACGTTATAAGCAGGATGGTGTTGGGTAAGAAGTACACGGAGAAGAGCGAAAACTCCATCGTTTCGCCGGAGGAGTTCAAGAAGATGCTGGACGAGTTGTTCCTTTTGAATGGGGTTTTGAATATCGGGGACTTCATCCCCTGGATTGATTTTCTGGACTTGCAGGGTTATATTAAGAGAATGAAGGCTTTGAGCAAGAAGTTTGACAGGTTTATGGAGCATGTGTTGGATGAACACAATGAGAGAAGAAAAGGGGTTAAGGATTATGCGGCCAAGGACATGGTGGATGTGCTTTTGCAGCTTGCAGATGATCCGAATCTTGAGGTCAAGCTTGAGAGGCACGGAGTCAAAGCTTTTACTCAGGACTTAATAGCTGGTGGGACAGAGAGCTCAGCAGTAACTGCAGAATGGGCAATTTCTGAGCTTCTTAAAAAGCCAGAGATCTTCAAGAAGGCCACAGAAGAGCTAGACAGGGTAATAGGGAGAGAGAGATGGGTTGAAGAGCAAGACATGCCCAATTTGCCTTACATCAATGCAATTGCAAAGGAAACAATGAGGCTCCACCCAGTGGCACCAATGTTAGTGCCAAGGCTAGCCAGAGAGGACTGCAACGTTGCTGGATATGACATCCCCAAGGGCACCCAAATTCTTGTCAATGTTTGGACCATTGGCAGGGACCCCACAATTTGGGACAACCCCAATGATTTTGAACCAGAAAGGTTCATGGGGAAAGACGTTGATGTGAAAGGGCATGACTATGAGTTGCTGCCATTTGGCGCTGGTAGAAGGATGTGCCCTGGGTACCCCCTTGGCCTTAAGGTGATTCAAGCAAGCTTGGCCAATCTCTTGCATGGGTTTCATTGGAGATTGCCTGATAATATGAACAAGGAGGATTTGAATATGGAGGAAATTTTTGGGCTCTCCACTCCTAAGAAATTCCCTCTGGATACTGTTGCTGAGCCTAGACTTGCAGCTCATCTTTATTCCCTCTGA 1548 0.4884 MAIELAVPSWVSTTSAAWLATFAVLLLFGRRLRRQRYNLPPGPKSWPIIGNLNLIGSLPHRSIHALSQKYGPIMHIWFGSNPIIVGSSVEMAKAFLKTHDATLAGRPKFAAGKYTTYNYSDITWSPYGPYWRQARKMCLMELFSAKRLESYEYIRKEELRAMLKELYESANQTVSLKDHLSTLSLNVISRMVLGKKYTEKSENSIVSPEEFKKMLDELFLLNGVLNIGDFIPWIDFLDLQGYIKRMKALSKKFDRFMEHVLDEHNERRKGVKDYAAKDMVDVLLQLADDPNLEVKLERHGVKAFTQDLIAGGTESSAVTAEWAISELLKKPEIFKKATEELDRVIGRERWVEEQDMPNLPYINAIAKETMRLHPVAPMLVPRLAREDCNVAGYDIPKGTQILVNVWTIGRDPTIWDNPNDFEPERFMGKDVDVKGHDYELLPFGAGRRMCPGYPLGLKVIQASLANLLHGFHWRLPDNMNKEDLNMEEIFGLSTPKKFPLDTVAEPRLAAHLYSL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0471 515 CDD CYP71_clan 71 500 - -
Glsi06g0471 515 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 FunFam Cytochrome P450 84A1 31 508 - -
Glsi06g0471 515 Gene3D Cytochrome P450 32 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 SUPERFAMILY Cytochrome P450 40 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g0471 515 PANTHER CYTOCHROME P450 98A9 14 514 - -
Glsi06g0471 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Glsi06g0471 515 Pfam Cytochrome P450 40 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0471 Glsi-ChrGlsi06 4235203 4237800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0471 22 515 Cytochrome P450 AT5G07990 42.315 1.85e-145 426