Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0462 ATGATCCAAAACTACTACCATCTTCAAACCCTTCATTCCCTTCAATCTTTCTTTCCATCTCTCAGGTTCCTTGTCAGCACAATGACCATGGAACCAAACTCAGCATCAGATCACATCCTAGACTGGCTCGAAGGTTCTGTTTCTTTCTTCTCATCATTCTTGGATGATCCTTATAACCCAGGTGGCATCGAAGATTATCAATTGTGGGGTCAGGGCCAAGACATAGGCCAACAATACCAAATTGATGTTGCTCCCGGTTCTCCTTATGTCACCACCACCACCATTTCTGCTGCTATCAGTACCAGCGCAACTCCCACTGAGCCTTATAATTGTTCTAATAATTCACCACCTTCTGATCTGCCAAAGAAAAGAAATGCCTCTGATGATTTATGTCTCAAACCATCTCAGAATCATAAGTCCAAGAAAAGTAAGAGCCGTCCAACGAGTGAAGTTGACAATGGAGGAGATGCAGTTATTGAAGGGACGGTGGTTAAGAAACCTGCTGGGAACAAGAAAGGTTCTGCCAAGGCCAACGGAAATAACTGTAATAACGGTAATAACAAGGAAGGGAGGTGGGCTGAGCAGTTGCTGAATCCTTGTGCTGTAGCCATGGCTGCAGGGAATCTGAATCGTGTGCAGCACCTCTTATATGTTCTCCATGAGCTCGCCTCGACCACTGGCGATGCCAACCACCGACTTGCTGCCCACGGTCTCCGGGCACTGACACACCATTTATCTTCTTCCACTACCTTTTCTTCCTCCTCTGCCTCTGCAGGGCCTATTAATTTTGCTTCTACAGACCCAAGATTCTTCCAACGATCACTGCTCAAGTTCTATGAGGTTAGCCCCTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATTCTGCAAATTCTTGCTGAAGAACCAAATAGTTCTTCACATACCCTTCACATCCTTGACATTGGGGTTTCTCATGGCTTTCAATGGCCAACATTTCTAGAGGCTTTGACTCGCCGACCCGGTGGACCTCCTCCTCTGGTTCGCCTCACAGTGGTCAATGCCTCCTCTGAGAAGGACCAAAACATGGAGACCCCATTTTCGATAGGTCCACCTGTTGACAACTTCTCTTCTAGGCTTCTTGGTTTTGCCAAGTCTATGAATATTAATTTACAGATAAACAAGCTCGATAGTCATCTATTACAGAATCTGAACACCCAGATTCTTAATGCCTCGCCGGATGAAACCTTTATTGTTTGTGCACAGTTTAGGCTCCACCATCTGAATCATAACGCTCCTGATGAACGAAGTGAGTTTCTGAAGGTACTGAGGAACATGGAGCCCAAGGGGGTGATACTAAGCGAGAACAACATGGAATGTTGCTGCAACAGTTGTGGGAATTTTGCTACAGGCTTTGCTAGAAGAGTGGAGTTCCTGTGGAAGTTCTTGGATTCAATAAGCTCAGCGTTCAAGGGCAGGGAGAGCGAGGAAAGGAGACTAATGGAGGGGGAGGCTGCAAAAGCGTTGACAAACCAGAGAGAGATGAATGAAGGGAAAGAGAAATGGTGTGAGAGAATGAAAGAAGCAGGGTTTGTGGGGGAGATATTTGGAGAGGACGCCATTGATGGAGCTCGAGCTTTGTTGAGGAAGTATGATAATAATTGGGAGATGAAAGCAGAAGAGAACAATACCAGTGTGGGACTATGGTGGAAGGGGCTGCCAGTTTCTTTCTGTACCTTGTGGAAGCTGGGAGGGAACGACAAGGGTGGATCAGGCTCAGCATTGACAACGCGGCTCTAG 1782 0.4635 MIQNYYHLQTLHSLQSFFPSLRFLVSTMTMEPNSASDHILDWLEGSVSFFSSFLDDPYNPGGIEDYQLWGQGQDIGQQYQIDVAPGSPYVTTTTISAAISTSATPTEPYNCSNNSPPSDLPKKRNASDDLCLKPSQNHKSKKSKSRPTSEVDNGGDAVIEGTVVKKPAGNKKGSAKANGNNCNNGNNKEGRWAEQLLNPCAVAMAAGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSTTFSSSSASAGPINFASTDPRFFQRSLLKFYEVSPWFSFPNNIANASILQILAEEPNSSSHTLHILDIGVSHGFQWPTFLEALTRRPGGPPPLVRLTVVNASSEKDQNMETPFSIGPPVDNFSSRLLGFAKSMNINLQINKLDSHLLQNLNTQILNASPDETFIVCAQFRLHHLNHNAPDERSEFLKVLRNMEPKGVILSENNMECCCNSCGNFATGFARRVEFLWKFLDSISSAFKGRESEERRLMEGEAAKALTNQREMNEGKEKWCERMKEAGFVGEIFGEDAIDGARALLRKYDNNWEMKAEENNTSVGLWWKGLPVSFCTLWKLGGNDKGGSGSALTTRL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0462 593 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 174 565 IPR005202 -
Glsi06g0462 593 ProSiteProfiles GRAS family profile. 184 576 IPR005202 -
Glsi06g0462 593 Pfam GRAS domain family 194 576 IPR005202 -
Glsi06g0462 593 MobiDBLite consensus disorder prediction 102 186 - -
Glsi06g0462 593 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0462 Glsi-ChrGlsi06 3967175 3968956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0462 29 576 GRAS Transcription Factor Family AT3G13840 49.911 3.45e-172 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi06g0462 GRAS 4.8e-75 CL0063